Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 AL356479.1-202ENST00000456933 714 ntTSL 3 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 MUTYH-236ENST00000529984 1029 ntTSL 2 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 TNFSF13-209ENST00000625791 955 ntTSL 2 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHD8Q9HCK8 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
CHD8Q9HCK8 SNORA30.1-201ENST00000363193 129 ntBASIC12.65□□□□□ -0.39
CHD8Q9HCK8 RNASE11-201ENST00000398008 872 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.39
CHD8Q9HCK8 AC041040.1-201ENST00000425197 460 ntBASIC12.65□□□□□ -0.39
CHD8Q9HCK8 AC002347.2-201ENST00000584139 171 ntTSL 3 BASIC12.65□□□□□ -0.39
CHD8Q9HCK8 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC12.65□□□□□ -0.39
CHD8Q9HCK8 AL033381.2-201ENST00000603854 732 ntBASIC12.65□□□□□ -0.39
CHD8Q9HCK8 TTC38-207ENST00000629918 162 ntTSL 5 BASIC12.65□□□□□ -0.39
CHD8Q9HCK8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
CHD8Q9HCK8 ATF4P4-201ENST00000393544 1930 ntBASIC12.65□□□□□ -0.39
CHD8Q9HCK8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 LIPC-204ENST00000433326 1484 ntTSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 SKAP1-208ENST00000584924 1477 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AC084018.2-201ENST00000613093 2607 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AC068760.1-201ENST00000493579 1953 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AC015656.1-201ENST00000624209 3578 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 GSTM2P1-201ENST00000405166 654 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 TINF2-210ENST00000559019 885 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AC007378.1-201ENST00000609765 478 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AD000864.1-201ENST00000624076 2295 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AL391005.1-201ENST00000623953 2435 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AP000343.1-201ENST00000440602 385 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AC233724.7-201ENST00000511476 253 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 OR52P2P-201ENST00000527287 955 ntBASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC12.64□□□□□ -0.39
CHD8Q9HCK8 AC131274.3-201ENST00000578745 1271 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms