Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
AP3S1Q92572 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 FLJ30679-201ENST00000624773 1980 ntBASIC12.43□□□□□ -0.42
AP3S1Q92572 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC12.43□□□□□ -0.42
AP3S1Q92572 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.43□□□□□ -0.42
AP3S1Q92572 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
AP3S1Q92572 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.43□□□□□ -0.42
AP3S1Q92572 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 BTBD7P1-201ENST00000447253 1453 ntBASIC12.43□□□□□ -0.42
AP3S1Q92572 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
AP3S1Q92572 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
AP3S1Q92572 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.43□□□□□ -0.42
AP3S1Q92572 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC12.43□□□□□ -0.42
AP3S1Q92572 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.43□□□□□ -0.42
AP3S1Q92572 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.43□□□□□ -0.42
AP3S1Q92572 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.43□□□□□ -0.42
AP3S1Q92572 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.43□□□□□ -0.42
AP3S1Q92572 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC12.43□□□□□ -0.42
AP3S1Q92572 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
AP3S1Q92572 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.43□□□□□ -0.42
AP3S1Q92572 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.43□□□□□ -0.42
AP3S1Q92572 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
AP3S1Q92572 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.43□□□□□ -0.42
AP3S1Q92572 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
AP3S1Q92572 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC12.43□□□□□ -0.42
AP3S1Q92572 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
AP3S1Q92572 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.43□□□□□ -0.42
AP3S1Q92572 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.43□□□□□ -0.42
AP3S1Q92572 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 C9orf170-201ENST00000623052 3239 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 CLASP2-218ENST00000487200 1940 ntTSL 2 BASIC12.43□□□□□ -0.42
AP3S1Q92572 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
AP3S1Q92572 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
AP3S1Q92572 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
AP3S1Q92572 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
AP3S1Q92572 GPRASP1-201ENST00000361600 5971 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
AP3S1Q92572 FER1L5-207ENST00000641731 6294 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
AP3S1Q92572 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S1Q92572 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S1Q92572 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 AL031432.4-201ENST00000641729 2190 ntBASIC12.42□□□□□ -0.42
AP3S1Q92572 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
AP3S1Q92572 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 SLC36A1-201ENST00000243389 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
AP3S1Q92572 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 C1QBPP1-201ENST00000400117 770 ntBASIC12.42□□□□□ -0.42
AP3S1Q92572 AC134915.1-201ENST00000426461 574 ntBASIC12.42□□□□□ -0.42
AP3S1Q92572 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.42□□□□□ -0.42
AP3S1Q92572 AL035414.1-201ENST00000451327 857 ntBASIC12.42□□□□□ -0.42
AP3S1Q92572 RN7SL399P-201ENST00000471648 279 ntBASIC12.42□□□□□ -0.42
AP3S1Q92572 KRT18P25-201ENST00000508931 1278 ntBASIC12.42□□□□□ -0.42
AP3S1Q92572 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.42□□□□□ -0.42
AP3S1Q92572 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 AL512310.5-201ENST00000551999 515 ntBASIC12.42□□□□□ -0.42
AP3S1Q92572 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC12.42□□□□□ -0.42
AP3S1Q92572 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.42□□□□□ -0.42
AP3S1Q92572 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC12.42□□□□□ -0.42
AP3S1Q92572 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
AP3S1Q92572 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 LINC00563-201ENST00000566370 1400 ntBASIC12.42□□□□□ -0.42
AP3S1Q92572 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.42□□□□□ -0.42
AP3S1Q92572 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.42□□□□□ -0.42
AP3S1Q92572 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
AP3S1Q92572 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.42□□□□□ -0.42
AP3S1Q92572 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.42□□□□□ -0.42
AP3S1Q92572 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
AP3S1Q92572 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms