Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM4P67936 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM4P67936 AC008494.3-201ENST00000606615 944 ntBASIC15.87■□□□□ 0.13
TPM4P67936 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM4P67936 RPSAP52-203ENST00000622976 1023 ntBASIC15.87■□□□□ 0.13
TPM4P67936 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM4P67936 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM4P67936 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM4P67936 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM4P67936 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TPM4P67936 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC15.87■□□□□ 0.13
TPM4P67936 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
TPM4P67936 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM4P67936 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TPM4P67936 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC15.87■□□□□ 0.13
TPM4P67936 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM4P67936 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TPM4P67936 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM4P67936 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TPM4P67936 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 SALL4P6-201ENST00000429385 1691 ntBASIC15.86■□□□□ 0.13
TPM4P67936 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM4P67936 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM4P67936 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM4P67936 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TPM4P67936 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TPM4P67936 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TPM4P67936 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM4P67936 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.86■□□□□ 0.13
TPM4P67936 RNA5SP486-201ENST00000515961 83 ntBASIC15.86■□□□□ 0.13
TPM4P67936 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TPM4P67936 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.86■□□□□ 0.13
TPM4P67936 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM4P67936 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.86■□□□□ 0.13
TPM4P67936 AC005498.2-205ENST00000593218 784 ntBASIC15.86■□□□□ 0.13
TPM4P67936 LINC02084-201ENST00000606069 1096 ntBASIC15.86■□□□□ 0.13
TPM4P67936 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.86■□□□□ 0.13
TPM4P67936 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TPM4P67936 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC15.86■□□□□ 0.13
TPM4P67936 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
TPM4P67936 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.86■□□□□ 0.13
TPM4P67936 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM4P67936 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM4P67936 REXO1L6P-201ENST00000603433 1515 ntBASIC15.85■□□□□ 0.13
TPM4P67936 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM4P67936 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC15.85■□□□□ 0.13
TPM4P67936 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC15.85■□□□□ 0.13
TPM4P67936 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TPM4P67936 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 AL136309.1-201ENST00000403917 691 ntBASIC15.85■□□□□ 0.13
TPM4P67936 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM4P67936 C2orf27AP3-201ENST00000434123 579 ntBASIC15.85■□□□□ 0.13
TPM4P67936 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.85■□□□□ 0.13
TPM4P67936 SERBP1P5-201ENST00000510079 1181 ntBASIC15.85■□□□□ 0.13
TPM4P67936 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.85■□□□□ 0.13
TPM4P67936 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TPM4P67936 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TPM4P67936 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.85■□□□□ 0.13
TPM4P67936 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.85■□□□□ 0.13
TPM4P67936 AL354718.3-201ENST00000616414 581 ntBASIC15.85■□□□□ 0.13
TPM4P67936 CR382287.1-201ENST00000623954 586 ntBASIC15.85■□□□□ 0.13
TPM4P67936 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC15.85■□□□□ 0.13
TPM4P67936 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC15.85■□□□□ 0.13
TPM4P67936 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TPM4P67936 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC15.85■□□□□ 0.13
TPM4P67936 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TPM4P67936 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TPM4P67936 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TPM4P67936 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TPM4P67936 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TPM4P67936 AC026271.4-201ENST00000578214 1833 ntBASIC15.84■□□□□ 0.13
TPM4P67936 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TPM4P67936 AC007952.5-201ENST00000572818 1486 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms