Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC5P40937 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC5P40937 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC15.51■□□□□ 0.07
RFC5P40937 TUBB4AP1-201ENST00000450755 1325 ntBASIC15.51■□□□□ 0.07
RFC5P40937 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.51■□□□□ 0.07
RFC5P40937 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 NME4-203ENST00000397722 1232 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC5P40937 CSNK1G2P1-201ENST00000442675 955 ntBASIC15.51■□□□□ 0.07
RFC5P40937 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.51■□□□□ 0.07
RFC5P40937 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.51■□□□□ 0.07
RFC5P40937 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC5P40937 NEU3-207ENST00000534628 746 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC5P40937 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
RFC5P40937 AC007952.4-201ENST00000573866 637 ntBASIC15.51■□□□□ 0.07
RFC5P40937 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC15.51■□□□□ 0.07
RFC5P40937 AC107464.3-201ENST00000609172 737 ntBASIC15.51■□□□□ 0.07
RFC5P40937 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
RFC5P40937 CR392039.2-201ENST00000623182 509 ntBASIC15.51■□□□□ 0.07
RFC5P40937 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC15.51■□□□□ 0.07
RFC5P40937 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.51■□□□□ 0.07
RFC5P40937 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RFC5P40937 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
RFC5P40937 MST1P2-201ENST00000457982 2291 ntBASIC15.51■□□□□ 0.07
RFC5P40937 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
RFC5P40937 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.51■□□□□ 0.07
RFC5P40937 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RFC5P40937 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RFC5P40937 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
RFC5P40937 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RFC5P40937 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.5■□□□□ 0.07
RFC5P40937 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.5■□□□□ 0.07
RFC5P40937 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
RFC5P40937 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 AC092638.2-201ENST00000441105 947 ntBASIC15.5■□□□□ 0.07
RFC5P40937 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC15.5■□□□□ 0.07
RFC5P40937 DPY19L2P5-201ENST00000456300 331 ntBASIC15.5■□□□□ 0.07
RFC5P40937 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.5■□□□□ 0.07
RFC5P40937 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.5■□□□□ 0.07
RFC5P40937 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.5■□□□□ 0.07
RFC5P40937 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC15.5■□□□□ 0.07
RFC5P40937 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC15.5■□□□□ 0.07
RFC5P40937 RN7SL555P-201ENST00000584742 339 ntBASIC15.5■□□□□ 0.07
RFC5P40937 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.5■□□□□ 0.07
RFC5P40937 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC15.5■□□□□ 0.07
RFC5P40937 AC091769.1-201ENST00000619576 568 ntBASIC15.5■□□□□ 0.07
RFC5P40937 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.5■□□□□ 0.07
RFC5P40937 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.5■□□□□ 0.07
RFC5P40937 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.5■□□□□ 0.07
RFC5P40937 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.5■□□□□ 0.07
RFC5P40937 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
RFC5P40937 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.5■□□□□ 0.07
RFC5P40937 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RFC5P40937 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC5P40937 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC5P40937 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RFC5P40937 AC008620.2-201ENST00000510294 1569 ntBASIC15.49■□□□□ 0.07
RFC5P40937 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
RFC5P40937 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC5P40937 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC5P40937 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RFC5P40937 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RFC5P40937 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms