Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC136604.1-202ENST00000425471 771 ntBASIC14.39□□□□□ -0.11
FDFT1P37268 AC104073.2-201ENST00000453737 312 ntBASIC14.39□□□□□ -0.11
FDFT1P37268 BNIP3P42-201ENST00000454982 569 ntBASIC14.39□□□□□ -0.11
FDFT1P37268 RN7SL277P-201ENST00000481521 288 ntBASIC14.39□□□□□ -0.11
FDFT1P37268 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.39□□□□□ -0.11
FDFT1P37268 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
FDFT1P37268 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.39□□□□□ -0.11
FDFT1P37268 AC093752.3-201ENST00000567343 901 ntBASIC14.39□□□□□ -0.11
FDFT1P37268 AC104982.3-201ENST00000581995 514 ntBASIC14.39□□□□□ -0.11
FDFT1P37268 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.39□□□□□ -0.11
FDFT1P37268 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.39□□□□□ -0.11
FDFT1P37268 BNIP3P29-201ENST00000598302 571 ntBASIC14.39□□□□□ -0.11
FDFT1P37268 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.39□□□□□ -0.11
FDFT1P37268 AC011447.5-201ENST00000616168 564 ntBASIC14.39□□□□□ -0.11
FDFT1P37268 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.39□□□□□ -0.11
FDFT1P37268 AC020917.4-201ENST00000623994 1999 ntBASIC14.39□□□□□ -0.11
FDFT1P37268 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
FDFT1P37268 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
FDFT1P37268 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
FDFT1P37268 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.39□□□□□ -0.11
FDFT1P37268 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
FDFT1P37268 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
FDFT1P37268 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.38□□□□□ -0.11
FDFT1P37268 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
FDFT1P37268 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
FDFT1P37268 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.38□□□□□ -0.11
FDFT1P37268 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.38□□□□□ -0.11
FDFT1P37268 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
FDFT1P37268 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.38□□□□□ -0.11
FDFT1P37268 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.38□□□□□ -0.11
FDFT1P37268 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.38□□□□□ -0.11
FDFT1P37268 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 DPM3-202ENST00000368399 517 ntBASIC14.38□□□□□ -0.11
FDFT1P37268 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC14.38□□□□□ -0.11
FDFT1P37268 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.38□□□□□ -0.11
FDFT1P37268 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.38□□□□□ -0.11
FDFT1P37268 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 FAM8A2P-201ENST00000528813 1142 ntBASIC14.38□□□□□ -0.11
FDFT1P37268 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.38□□□□□ -0.11
FDFT1P37268 MIR3188-201ENST00000583494 85 ntBASIC14.38□□□□□ -0.11
FDFT1P37268 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.38□□□□□ -0.11
FDFT1P37268 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 AL157813.1-201ENST00000612996 587 ntBASIC14.38□□□□□ -0.11
FDFT1P37268 AC005695.3-201ENST00000614522 232 ntBASIC14.38□□□□□ -0.11
FDFT1P37268 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 AL355102.3-201ENST00000554299 1678 ntBASIC14.38□□□□□ -0.11
FDFT1P37268 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.38□□□□□ -0.11
FDFT1P37268 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
FDFT1P37268 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
FDFT1P37268 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.38□□□□□ -0.11
FDFT1P37268 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC14.38□□□□□ -0.11
FDFT1P37268 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC14.38□□□□□ -0.11
FDFT1P37268 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
FDFT1P37268 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
FDFT1P37268 MKRN5P-201ENST00000445263 1467 ntBASIC14.38□□□□□ -0.11
FDFT1P37268 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.37□□□□□ -0.11
FDFT1P37268 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
FDFT1P37268 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
FDFT1P37268 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.37□□□□□ -0.11
FDFT1P37268 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 BRD7P5-201ENST00000299197 1822 ntBASIC14.37□□□□□ -0.11
FDFT1P37268 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
FDFT1P37268 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.37□□□□□ -0.11
FDFT1P37268 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.37□□□□□ -0.11
FDFT1P37268 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.37□□□□□ -0.11
FDFT1P37268 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
FDFT1P37268 MIR497HG-202ENST00000572453 3838 ntBASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms