Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 HIST2H2BC-201ENST00000498492 580 ntBASIC14.9□□□□□ -0.02
CHRNA3P32297 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNA3P32297 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNA3P32297 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC14.9□□□□□ -0.02
CHRNA3P32297 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNA3P32297 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNA3P32297 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC14.9□□□□□ -0.02
CHRNA3P32297 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 AC009884.2-201ENST00000603110 324 ntBASIC14.9□□□□□ -0.02
CHRNA3P32297 MIR6720-201ENST00000611664 98 ntBASIC14.9□□□□□ -0.02
CHRNA3P32297 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNA3P32297 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
CHRNA3P32297 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 AC068587.8-201ENST00000641239 219 ntBASIC14.9□□□□□ -0.02
CHRNA3P32297 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNA3P32297 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.9□□□□□ -0.02
CHRNA3P32297 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.9□□□□□ -0.02
CHRNA3P32297 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.9□□□□□ -0.02
CHRNA3P32297 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CHRNA3P32297 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CHRNA3P32297 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNA3P32297 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 LAP3P2-201ENST00000454686 1454 ntBASIC14.89□□□□□ -0.03
CHRNA3P32297 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNA3P32297 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNA3P32297 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CHRNA3P32297 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNA3P32297 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNA3P32297 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNA3P32297 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNA3P32297 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CHRNA3P32297 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CHRNA3P32297 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.89□□□□□ -0.03
CHRNA3P32297 AC005077.2-201ENST00000449786 690 ntBASIC14.89□□□□□ -0.03
CHRNA3P32297 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.89□□□□□ -0.03
CHRNA3P32297 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.89□□□□□ -0.03
CHRNA3P32297 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
CHRNA3P32297 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CHRNA3P32297 ACTG1P17-201ENST00000558391 1119 ntBASIC14.89□□□□□ -0.03
CHRNA3P32297 AC013355.1-201ENST00000562625 723 ntBASIC14.89□□□□□ -0.03
CHRNA3P32297 NDUFV2P1-201ENST00000596415 907 ntBASIC14.89□□□□□ -0.03
CHRNA3P32297 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CHRNA3P32297 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNA3P32297 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNA3P32297 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CHRNA3P32297 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC14.89□□□□□ -0.03
CHRNA3P32297 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
CHRNA3P32297 AC024075.2-201ENST00000598112 1473 ntBASIC14.89□□□□□ -0.03
CHRNA3P32297 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNA3P32297 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CHRNA3P32297 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CHRNA3P32297 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CHRNA3P32297 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CHRNA3P32297 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNA3P32297 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNA3P32297 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNA3P32297 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.88□□□□□ -0.03
CHRNA3P32297 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.88□□□□□ -0.03
CHRNA3P32297 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CHRNA3P32297 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.88□□□□□ -0.03
CHRNA3P32297 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.88□□□□□ -0.03
CHRNA3P32297 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms