Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL4P13236 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL4P13236 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL4P13236 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCL4P13236 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL4P13236 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCL4P13236 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL4P13236 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL4P13236 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL4P13236 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 AL390755.1-201ENST00000623716 2027 ntBASIC13.15□□□□□ -0.3
CCL4P13236 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL4P13236 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL4P13236 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCL4P13236 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL4P13236 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL4P13236 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CCL4P13236 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL4P13236 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL4P13236 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CCL4P13236 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL4P13236 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL4P13236 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL4P13236 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL4P13236 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC13.15□□□□□ -0.3
CCL4P13236 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL4P13236 TYMSP2-201ENST00000589501 424 ntBASIC13.15□□□□□ -0.3
CCL4P13236 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL4P13236 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC13.15□□□□□ -0.3
CCL4P13236 AP001527.2-201ENST00000614441 631 ntBASIC13.15□□□□□ -0.3
CCL4P13236 ESR1-214ENST00000638569 132 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL4P13236 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL4P13236 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.15□□□□□ -0.3
CCL4P13236 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL4P13236 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCL4P13236 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL4P13236 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
CCL4P13236 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CCL4P13236 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL4P13236 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
CCL4P13236 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCL4P13236 Z98885.3-201ENST00000624882 1757 ntBASIC13.15□□□□□ -0.31
CCL4P13236 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CCL4P13236 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL4P13236 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CCL4P13236 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 AC092115.1-201ENST00000566277 1402 ntBASIC13.14□□□□□ -0.31
CCL4P13236 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL4P13236 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.14□□□□□ -0.31
CCL4P13236 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCL4P13236 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CCL4P13236 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL4P13236 GGTLC4P-201ENST00000402176 664 ntBASIC13.14□□□□□ -0.31
CCL4P13236 ACTBP7-201ENST00000418351 1124 ntBASIC13.14□□□□□ -0.31
CCL4P13236 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CCL4P13236 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL4P13236 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL4P13236 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.14□□□□□ -0.31
CCL4P13236 AL451000.1-201ENST00000451300 1186 ntBASIC13.14□□□□□ -0.31
CCL4P13236 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC13.14□□□□□ -0.31
CCL4P13236 CD44-224ENST00000526669 870 ntTSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms