Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RAE1P78406 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RAE1P78406 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
RAE1P78406 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 AC239868.1-201ENST00000369385 493 ntBASIC13.33□□□□□ -0.28
RAE1P78406 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RAE1P78406 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.33□□□□□ -0.28
RAE1P78406 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.33□□□□□ -0.28
RAE1P78406 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.33□□□□□ -0.28
RAE1P78406 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 AC006033.1-201ENST00000440505 426 ntBASIC13.33□□□□□ -0.28
RAE1P78406 SLC25A15P3-201ENST00000505530 290 ntBASIC13.33□□□□□ -0.28
RAE1P78406 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC13.33□□□□□ -0.28
RAE1P78406 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.33□□□□□ -0.28
RAE1P78406 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.33□□□□□ -0.28
RAE1P78406 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.33□□□□□ -0.28
RAE1P78406 AC138649.2-201ENST00000615886 705 ntBASIC13.33□□□□□ -0.28
RAE1P78406 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 NAP1L6-202ENST00000641404 1222 ntBASIC13.33□□□□□ -0.28
RAE1P78406 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.33□□□□□ -0.28
RAE1P78406 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
RAE1P78406 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
RAE1P78406 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RAE1P78406 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.33□□□□□ -0.28
RAE1P78406 COL6A4P2-202ENST00000504443 2753 ntBASIC13.33□□□□□ -0.28
RAE1P78406 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 TUBBP5-203ENST00000508529 1334 ntBASIC13.33□□□□□ -0.28
RAE1P78406 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAE1P78406 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.32□□□□□ -0.28
RAE1P78406 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.32□□□□□ -0.28
RAE1P78406 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.32□□□□□ -0.28
RAE1P78406 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.32□□□□□ -0.28
RAE1P78406 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.32□□□□□ -0.28
RAE1P78406 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.32□□□□□ -0.28
RAE1P78406 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.32□□□□□ -0.28
RAE1P78406 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC13.32□□□□□ -0.28
RAE1P78406 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 ZNF767P-206ENST00000513792 565 ntBASIC13.32□□□□□ -0.28
RAE1P78406 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.32□□□□□ -0.28
RAE1P78406 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.32□□□□□ -0.28
RAE1P78406 NDUFB10P1-201ENST00000567319 521 ntBASIC13.32□□□□□ -0.28
RAE1P78406 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.32□□□□□ -0.28
RAE1P78406 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.32□□□□□ -0.28
RAE1P78406 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
RAE1P78406 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
RAE1P78406 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
RAE1P78406 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.32□□□□□ -0.28
RAE1P78406 FRMPD2B-201ENST00000431305 1347 ntBASIC13.32□□□□□ -0.28
RAE1P78406 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC13.32□□□□□ -0.28
RAE1P78406 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.32□□□□□ -0.28
RAE1P78406 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
RAE1P78406 AL358781.1-202ENST00000321081 1360 ntBASIC13.32□□□□□ -0.28
RAE1P78406 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
RAE1P78406 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.32□□□□□ -0.28
RAE1P78406 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms