Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
WNT3AP56704 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
WNT3AP56704 AC008132.1-202ENST00000342005 1389 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
WNT3AP56704 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 AGAP12P-201ENST00000585227 2359 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.23□□□□□ -0.13
WNT3AP56704 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
WNT3AP56704 MIR769-201ENST00000390225 118 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 ELK2AP-201ENST00000392510 1007 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.23□□□□□ -0.13
WNT3AP56704 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.23□□□□□ -0.13
WNT3AP56704 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.23□□□□□ -0.13
WNT3AP56704 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.23□□□□□ -0.13
WNT3AP56704 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.23□□□□□ -0.13
WNT3AP56704 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.23□□□□□ -0.13
WNT3AP56704 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.23□□□□□ -0.13
WNT3AP56704 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 NDUFB10P1-201ENST00000567319 521 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 PHBP15-201ENST00000574228 665 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
WNT3AP56704 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.23□□□□□ -0.13
WNT3AP56704 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.23□□□□□ -0.13
WNT3AP56704 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
WNT3AP56704 LINC01783-202ENST00000614408 828 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 BX284668.2-205ENST00000619677 828 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 AC079336.7-201ENST00000623428 1078 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC14.23□□□□□ -0.13
WNT3AP56704 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
WNT3AP56704 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
WNT3AP56704 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
WNT3AP56704 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
WNT3AP56704 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 AC025183.3-201ENST00000623526 1482 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 DMBT1P1-203ENST00000636837 4628 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 AC093462.1-201ENST00000621167 1683 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 AC135782.3-201ENST00000562782 2105 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 PTENP1-202ENST00000532280 3996 ntBASIC14.23□□□□□ -0.13
WNT3AP56704 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.23□□□□□ -0.13
WNT3AP56704 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
WNT3AP56704 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.23□□□□□ -0.13
WNT3AP56704 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3AP56704 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3AP56704 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3AP56704 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3AP56704 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3AP56704 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3AP56704 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3AP56704 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3AP56704 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.22□□□□□ -0.13
WNT3AP56704 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3AP56704 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3AP56704 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
WNT3AP56704 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.22□□□□□ -0.13
WNT3AP56704 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3AP56704 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3AP56704 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3AP56704 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC14.22□□□□□ -0.13
WNT3AP56704 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
WNT3AP56704 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
WNT3AP56704 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.22□□□□□ -0.13
WNT3AP56704 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
WNT3AP56704 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms