Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
VARSP26640 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.02□□□□□ -0.17
VARSP26640 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
VARSP26640 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.02□□□□□ -0.17
VARSP26640 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 FAM90A12P-201ENST00000519497 2375 ntBASIC14.02□□□□□ -0.17
VARSP26640 FAM90A24P-201ENST00000520792 2369 ntBASIC14.02□□□□□ -0.17
VARSP26640 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC14.02□□□□□ -0.17
VARSP26640 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VARSP26640 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
VARSP26640 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VARSP26640 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
VARSP26640 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC14.01□□□□□ -0.17
VARSP26640 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VARSP26640 AL157996.1-201ENST00000624684 2299 ntBASIC14.01□□□□□ -0.17
VARSP26640 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC14.01□□□□□ -0.17
VARSP26640 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 MIR663B-201ENST00000408361 115 ntBASIC14.01□□□□□ -0.17
VARSP26640 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.01□□□□□ -0.17
VARSP26640 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.01□□□□□ -0.17
VARSP26640 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.01□□□□□ -0.17
VARSP26640 HSPB1P2-201ENST00000448722 546 ntBASIC14.01□□□□□ -0.17
VARSP26640 EIF2S2P5-201ENST00000457635 968 ntBASIC14.01□□□□□ -0.17
VARSP26640 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.01□□□□□ -0.17
VARSP26640 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.01□□□□□ -0.17
VARSP26640 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
VARSP26640 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 AC005730.2-201ENST00000564549 1184 ntBASIC14.01□□□□□ -0.17
VARSP26640 AC005962.1-201ENST00000584100 773 ntBASIC14.01□□□□□ -0.17
VARSP26640 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.01□□□□□ -0.17
VARSP26640 AL353729.2-201ENST00000605859 1249 ntBASIC14.01□□□□□ -0.17
VARSP26640 AL021578.1-201ENST00000613646 709 ntBASIC14.01□□□□□ -0.17
VARSP26640 AL391262.2-201ENST00000622466 494 ntBASIC14.01□□□□□ -0.17
VARSP26640 Z98259.2-201ENST00000641583 609 ntBASIC14.01□□□□□ -0.17
VARSP26640 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC14.01□□□□□ -0.17
VARSP26640 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VARSP26640 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
VARSP26640 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VARSP26640 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 AC004241.5-201ENST00000623870 2448 ntBASIC14.01□□□□□ -0.17
VARSP26640 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.01□□□□□ -0.17
VARSP26640 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VARSP26640 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.01□□□□□ -0.17
VARSP26640 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
VARSP26640 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VARSP26640 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14□□□□□ -0.17
VARSP26640 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC14□□□□□ -0.17
VARSP26640 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14□□□□□ -0.17
VARSP26640 AC073548.1-201ENST00000624088 1882 ntBASIC14□□□□□ -0.17
VARSP26640 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14□□□□□ -0.17
VARSP26640 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14□□□□□ -0.17
VARSP26640 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14□□□□□ -0.17
VARSP26640 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14□□□□□ -0.17
VARSP26640 AL133466.1-201ENST00000447582 150 ntBASIC14□□□□□ -0.17
VARSP26640 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VARSP26640 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14□□□□□ -0.17
VARSP26640 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC14□□□□□ -0.17
VARSP26640 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14□□□□□ -0.17
VARSP26640 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14□□□□□ -0.17
VARSP26640 RBM8B-201ENST00000555532 525 ntBASIC14□□□□□ -0.17
VARSP26640 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC14□□□□□ -0.17
VARSP26640 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14□□□□□ -0.17
VARSP26640 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
VARSP26640 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14□□□□□ -0.17
VARSP26640 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14□□□□□ -0.17
VARSP26640 AC108359.1-201ENST00000616451 1211 ntBASIC14□□□□□ -0.17
VARSP26640 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14□□□□□ -0.17
VARSP26640 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms