Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC11.07□□□□□ -0.64
CD28P10747 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC11.07□□□□□ -0.64
CD28P10747 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
CD28P10747 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 FTX-216ENST00000638985 1367 ntTSL 5 BASIC11.07□□□□□ -0.64
CD28P10747 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 PYY2-201ENST00000315776 282 ntBASIC11.07□□□□□ -0.64
CD28P10747 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 AC006987.1-201ENST00000413610 527 ntBASIC11.07□□□□□ -0.64
CD28P10747 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 RPL13AP19-201ENST00000434320 584 ntBASIC11.07□□□□□ -0.64
CD28P10747 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 LYPLA2P1-203ENST00000447689 696 ntBASIC11.07□□□□□ -0.64
CD28P10747 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC11.07□□□□□ -0.64
CD28P10747 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC11.07□□□□□ -0.64
CD28P10747 DPY19L2P5-201ENST00000456300 331 ntBASIC11.07□□□□□ -0.64
CD28P10747 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC11.07□□□□□ -0.64
CD28P10747 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC11.07□□□□□ -0.64
CD28P10747 MIR2392-201ENST00000584881 84 ntBASIC11.07□□□□□ -0.64
CD28P10747 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC11.07□□□□□ -0.64
CD28P10747 AC105137.3-201ENST00000617588 984 ntBASIC11.07□□□□□ -0.64
CD28P10747 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CD28P10747 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC11.07□□□□□ -0.64
CD28P10747 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
CD28P10747 AC011498.7-201ENST00000624986 2027 ntBASIC11.07□□□□□ -0.64
CD28P10747 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CD28P10747 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC11.07□□□□□ -0.64
CD28P10747 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CD28P10747 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
CD28P10747 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.06□□□□□ -0.64
CD28P10747 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CD28P10747 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
CD28P10747 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CD28P10747 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CD28P10747 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
CD28P10747 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CD28P10747 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
CD28P10747 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
CD28P10747 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
CD28P10747 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC11.06□□□□□ -0.64
CD28P10747 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CD28P10747 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CD28P10747 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CD28P10747 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC11.06□□□□□ -0.64
CD28P10747 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC11.06□□□□□ -0.64
CD28P10747 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CD28P10747 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC11.06□□□□□ -0.64
CD28P10747 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC11.06□□□□□ -0.64
CD28P10747 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC11.06□□□□□ -0.64
CD28P10747 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC11.06□□□□□ -0.64
CD28P10747 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
CD28P10747 RPS23-204ENST00000507980 836 ntTSL 2 BASIC11.06□□□□□ -0.64
CD28P10747 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC11.06□□□□□ -0.64
CD28P10747 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC11.06□□□□□ -0.64
CD28P10747 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC11.06□□□□□ -0.64
CD28P10747 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC11.06□□□□□ -0.64
CD28P10747 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC11.06□□□□□ -0.64
CD28P10747 DBP-202ENST00000593500 712 ntTSL 2 BASIC11.06□□□□□ -0.64
CD28P10747 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CD28P10747 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC11.06□□□□□ -0.64
CD28P10747 AC104506.1-201ENST00000609247 429 ntBASIC11.06□□□□□ -0.64
CD28P10747 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC11.06□□□□□ -0.64
CD28P10747 MIR6074-201ENST00000612054 107 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms