Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AL031719.1-201ENST00000623365 2587 ntBASIC14.2□□□□□ -0.14
RFPL1O75677 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
RFPL1O75677 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RFPL1O75677 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.19□□□□□ -0.14
RFPL1O75677 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
RFPL1O75677 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RFPL1O75677 SHMT1P1-201ENST00000419974 1312 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RFPL1O75677 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.19□□□□□ -0.14
RFPL1O75677 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
RFPL1O75677 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RFPL1O75677 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.19□□□□□ -0.14
RFPL1O75677 CR383656.2-201ENST00000548656 2254 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.19□□□□□ -0.14
RFPL1O75677 HSPB1P2-201ENST00000448722 546 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 HIST2H2BB-201ENST00000449108 381 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 UPF3AP2-201ENST00000457924 1132 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.19□□□□□ -0.14
RFPL1O75677 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC14.19□□□□□ -0.14
RFPL1O75677 HIST2H2BC-201ENST00000498492 580 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 AC022217.1-201ENST00000521069 738 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 AC126915.1-201ENST00000522847 1038 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 RBM8B-201ENST00000555532 525 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RFPL1O75677 AC079328.1-201ENST00000560358 952 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.19□□□□□ -0.14
RFPL1O75677 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.19□□□□□ -0.14
RFPL1O75677 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.19□□□□□ -0.14
RFPL1O75677 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.19□□□□□ -0.14
RFPL1O75677 NDUFV2P1-201ENST00000596415 907 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.19□□□□□ -0.14
RFPL1O75677 AC015967.2-201ENST00000624092 234 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 AC006435.4-201ENST00000625037 234 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 AL356737.1-201ENST00000634391 234 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
RFPL1O75677 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.19□□□□□ -0.14
RFPL1O75677 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RFPL1O75677 AC115284.2-201ENST00000624646 2054 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RFPL1O75677 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.19□□□□□ -0.14
RFPL1O75677 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.19□□□□□ -0.14
RFPL1O75677 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC14.19□□□□□ -0.14
RFPL1O75677 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RFPL1O75677 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.19□□□□□ -0.14
RFPL1O75677 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC14.19□□□□□ -0.14
RFPL1O75677 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 LINC01165-201ENST00000445190 1623 ntBASIC14.19□□□□□ -0.14
RFPL1O75677 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RFPL1O75677 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.19□□□□□ -0.14
RFPL1O75677 AP003969.2-201ENST00000623739 2275 ntBASIC14.18□□□□□ -0.14
RFPL1O75677 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.18□□□□□ -0.14
RFPL1O75677 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.18□□□□□ -0.14
RFPL1O75677 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RFPL1O75677 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 AC087386.2-201ENST00000623212 4637 ntBASIC14.18□□□□□ -0.14
RFPL1O75677 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 SNORA50C-201ENST00000408535 133 ntBASIC14.18□□□□□ -0.14
RFPL1O75677 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.18□□□□□ -0.14
RFPL1O75677 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.18□□□□□ -0.14
RFPL1O75677 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.18□□□□□ -0.14
RFPL1O75677 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RFPL1O75677 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.18□□□□□ -0.14
RFPL1O75677 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.18□□□□□ -0.14
RFPL1O75677 SNORA50.1-201ENST00000628590 135 ntBASIC14.18□□□□□ -0.14
RFPL1O75677 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms