Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 TMEM107-201ENST00000316425 756 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 TPT1-203ENST00000379056 1101 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 AC006372.1-201ENST00000449903 546 ntTSL 2 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 AC104212.2-201ENST00000478813 628 ntBASIC12.69□□□□□ -0.38
CHD8Q9HCK8 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 AC011456.1-201ENST00000592270 536 ntTSL 4 BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 AC024580.2-201ENST00000623363 231 ntBASIC12.69□□□□□ -0.38
CHD8Q9HCK8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CHD8Q9HCK8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.68□□□□□ -0.38
CHD8Q9HCK8 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 CDCA7L-202ENST00000373934 1830 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 ZSCAN29-207ENST00000568898 1389 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 CST11-202ENST00000377009 554 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 HIST1H2BN-201ENST00000396980 432 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 CCDC103-203ENST00000410027 571 ntTSL 4 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 PPP3CB-AS1-201ENST00000422977 930 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AKR1C6P-201ENST00000432950 983 ntBASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AC022217.2-201ENST00000518941 472 ntTSL 2 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 STMN4-203ENST00000519614 1273 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 PEBP1P1-201ENST00000554856 510 ntBASIC12.68□□□□□ -0.38
CHD8Q9HCK8 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AC127496.5-202ENST00000572036 869 ntTSL 5 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AC090950.1-202ENST00000605733 644 ntBASIC12.68□□□□□ -0.38
CHD8Q9HCK8 BACH1-AS1-202ENST00000615718 700 ntTSL 5 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AL137028.1-201ENST00000620521 555 ntBASIC12.68□□□□□ -0.38
CHD8Q9HCK8 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 GNLY-201ENST00000263863 846 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 SPINK4-201ENST00000379721 402 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 CMC2-202ENST00000486645 766 ntTSL 3 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 SMUG1-213ENST00000506595 712 ntTSL 5 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC12.68□□□□□ -0.38
CHD8Q9HCK8 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.67□□□□□ -0.38
CHD8Q9HCK8 OR6D1P-202ENST00000641007 5290 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms