Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 AC008687.7-202ENST00000637404 953 ntBASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 AL354989.2-201ENST00000435838 1540 ntBASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 SHC1P1-201ENST00000425230 1745 ntBASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 GHET1-201ENST00000627071 1906 ntBASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.27□□□□□ -0.29
AMBRA1Q9C0C7 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 AC099336.1-201ENST00000417053 1171 ntBASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 BCYRN1-201ENST00000418539 200 ntBASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 HLA-DPB2-205ENST00000435074 1188 ntBASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 ST13P19-201ENST00000442505 1124 ntBASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 KRT8P4-201ENST00000509735 1454 ntBASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 AL136301.1-201ENST00000615830 422 ntBASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 AC138951.2-201ENST00000623455 1161 ntBASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
AMBRA1Q9C0C7 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms