Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AC007952.5-201ENST00000572818 1486 ntBASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AC092053.3-201ENST00000641308 4975 ntBASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 PTPA-220ENST00000436883 532 ntTSL 4 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 KRT18P15-201ENST00000458108 1291 ntBASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AC100850.1-201ENST00000506768 649 ntBASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AC009955.4-201ENST00000597192 544 ntBASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AC090386.2-201ENST00000623010 1039 ntBASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AC025048.6-201ENST00000634326 1161 ntBASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
HDHD3Q9BSH5 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC11.96□□□□□ -0.5
HDHD3Q9BSH5 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
HDHD3Q9BSH5 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
HDHD3Q9BSH5 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
HDHD3Q9BSH5 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
HDHD3Q9BSH5 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
HDHD3Q9BSH5 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC11.96□□□□□ -0.5
HDHD3Q9BSH5 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.96□□□□□ -0.5
HDHD3Q9BSH5 PHB-210ENST00000511832 1509 ntTSL 2 BASIC11.96□□□□□ -0.5
HDHD3Q9BSH5 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 LINC00115-201ENST00000473798 1317 ntBASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
HDHD3Q9BSH5 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms