Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.49□□□□□ -0.41
SEC61A1P61619 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.49□□□□□ -0.41
SEC61A1P61619 RN7SL713P-201ENST00000582127 302 ntBASIC12.49□□□□□ -0.41
SEC61A1P61619 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 EEF1DP1-201ENST00000585891 896 ntBASIC12.49□□□□□ -0.41
SEC61A1P61619 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SEC61A1P61619 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.49□□□□□ -0.41
SEC61A1P61619 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
SEC61A1P61619 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 AC072061.1-201ENST00000569710 2234 ntBASIC12.49□□□□□ -0.41
SEC61A1P61619 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SEC61A1P61619 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.49□□□□□ -0.41
SEC61A1P61619 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
SEC61A1P61619 AC020910.5-201ENST00000623668 1865 ntBASIC12.48□□□□□ -0.41
SEC61A1P61619 KHSRPP1-201ENST00000427983 1768 ntBASIC12.48□□□□□ -0.41
SEC61A1P61619 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SEC61A1P61619 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 VENTXP1-201ENST00000569334 2716 ntBASIC12.48□□□□□ -0.41
SEC61A1P61619 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
SEC61A1P61619 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
SEC61A1P61619 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 FKBP4P6-201ENST00000457486 1332 ntBASIC12.48□□□□□ -0.41
SEC61A1P61619 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.48□□□□□ -0.41
SEC61A1P61619 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.48□□□□□ -0.41
SEC61A1P61619 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 FTLP10-202ENST00000505798 471 ntBASIC12.48□□□□□ -0.41
SEC61A1P61619 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC12.48□□□□□ -0.41
SEC61A1P61619 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SEC61A1P61619 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC12.48□□□□□ -0.41
SEC61A1P61619 KLK3-211ENST00000597483 810 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 AC005695.3-201ENST00000614522 232 ntBASIC12.48□□□□□ -0.41
SEC61A1P61619 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.48□□□□□ -0.41
SEC61A1P61619 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC12.48□□□□□ -0.41
SEC61A1P61619 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SEC61A1P61619 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SEC61A1P61619 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.48□□□□□ -0.41
SEC61A1P61619 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SEC61A1P61619 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SEC61A1P61619 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.48□□□□□ -0.41
SEC61A1P61619 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SEC61A1P61619 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SEC61A1P61619 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC12.47□□□□□ -0.41
SEC61A1P61619 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.47□□□□□ -0.41
SEC61A1P61619 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SEC61A1P61619 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.47□□□□□ -0.41
SEC61A1P61619 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SEC61A1P61619 AC009093.2-202ENST00000620513 2079 ntBASIC12.47□□□□□ -0.41
SEC61A1P61619 AP000437.1-201ENST00000624057 2085 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms