Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.47□□□□□ -0.41
CX3CR1P49238 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CX3CR1P49238 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.47□□□□□ -0.41
CX3CR1P49238 KRT18P36-201ENST00000411618 1276 ntBASIC12.47□□□□□ -0.41
CX3CR1P49238 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 MTX1P1-201ENST00000440904 838 ntBASIC12.47□□□□□ -0.41
CX3CR1P49238 OR2R1P-201ENST00000441404 914 ntBASIC12.47□□□□□ -0.41
CX3CR1P49238 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.47□□□□□ -0.41
CX3CR1P49238 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC12.47□□□□□ -0.41
CX3CR1P49238 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.47□□□□□ -0.41
CX3CR1P49238 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
CX3CR1P49238 MIR497HG-202ENST00000572453 3838 ntBASIC12.47□□□□□ -0.41
CX3CR1P49238 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.47□□□□□ -0.41
CX3CR1P49238 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.47□□□□□ -0.41
CX3CR1P49238 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC12.47□□□□□ -0.41
CX3CR1P49238 AC010328.2-201ENST00000597698 1111 ntBASIC12.47□□□□□ -0.41
CX3CR1P49238 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC12.47□□□□□ -0.41
CX3CR1P49238 AC133552.6-201ENST00000613406 534 ntBASIC12.47□□□□□ -0.41
CX3CR1P49238 AL035252.4-201ENST00000624174 288 ntBASIC12.47□□□□□ -0.41
CX3CR1P49238 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CX3CR1P49238 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.47□□□□□ -0.41
CX3CR1P49238 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
CX3CR1P49238 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.47□□□□□ -0.41
CX3CR1P49238 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CX3CR1P49238 AC018629.1-201ENST00000623381 1736 ntBASIC12.47□□□□□ -0.41
CX3CR1P49238 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CX3CR1P49238 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
CX3CR1P49238 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.47□□□□□ -0.41
CX3CR1P49238 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.47□□□□□ -0.41
CX3CR1P49238 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.47□□□□□ -0.41
CX3CR1P49238 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
CX3CR1P49238 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.46□□□□□ -0.41
CX3CR1P49238 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.46□□□□□ -0.41
CX3CR1P49238 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.46□□□□□ -0.41
CX3CR1P49238 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.46□□□□□ -0.41
CX3CR1P49238 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CX3CR1P49238 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.46□□□□□ -0.41
CX3CR1P49238 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.46□□□□□ -0.41
CX3CR1P49238 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
CX3CR1P49238 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
CX3CR1P49238 AC004241.5-201ENST00000623870 2448 ntBASIC12.46□□□□□ -0.41
CX3CR1P49238 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CX3CR1P49238 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.46□□□□□ -0.41
CX3CR1P49238 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 AC083964.2-201ENST00000623988 2396 ntBASIC12.46□□□□□ -0.41
CX3CR1P49238 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.46□□□□□ -0.41
CX3CR1P49238 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.46□□□□□ -0.41
CX3CR1P49238 FAM21FP-201ENST00000426241 1131 ntBASIC12.46□□□□□ -0.41
CX3CR1P49238 HSPB1P2-201ENST00000448722 546 ntBASIC12.46□□□□□ -0.41
CX3CR1P49238 TUBB8P8-201ENST00000458717 1058 ntBASIC12.46□□□□□ -0.41
CX3CR1P49238 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.46□□□□□ -0.41
CX3CR1P49238 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC12.46□□□□□ -0.41
CX3CR1P49238 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.46□□□□□ -0.41
CX3CR1P49238 HILS1-202ENST00000545329 423 ntBASIC12.46□□□□□ -0.41
CX3CR1P49238 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 AP005482.1-201ENST00000563722 1273 ntBASIC12.46□□□□□ -0.41
CX3CR1P49238 AC009542.2-202ENST00000619004 1067 ntBASIC12.46□□□□□ -0.41
CX3CR1P49238 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
CX3CR1P49238 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
CX3CR1P49238 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CX3CR1P49238 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.46□□□□□ -0.42
CX3CR1P49238 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
CX3CR1P49238 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.46□□□□□ -0.42
CX3CR1P49238 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
CX3CR1P49238 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms