Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CTSBP07858 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSBP07858 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.29□□□□□ -0.28
CTSBP07858 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.29□□□□□ -0.28
CTSBP07858 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSBP07858 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC13.29□□□□□ -0.28
CTSBP07858 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSBP07858 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.29□□□□□ -0.28
CTSBP07858 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CTSBP07858 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CTSBP07858 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
CTSBP07858 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC13.28□□□□□ -0.28
CTSBP07858 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CTSBP07858 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CTSBP07858 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
CTSBP07858 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.28□□□□□ -0.28
CTSBP07858 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CTSBP07858 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC13.28□□□□□ -0.28
CTSBP07858 AC012362.1-201ENST00000434906 739 ntBASIC13.28□□□□□ -0.28
CTSBP07858 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.28□□□□□ -0.28
CTSBP07858 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.28□□□□□ -0.28
CTSBP07858 LYPLA2P1-203ENST00000447689 696 ntBASIC13.28□□□□□ -0.28
CTSBP07858 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CTSBP07858 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC13.28□□□□□ -0.28
CTSBP07858 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC13.28□□□□□ -0.28
CTSBP07858 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CTSBP07858 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC13.28□□□□□ -0.28
CTSBP07858 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.28□□□□□ -0.28
CTSBP07858 AC132825.4-202ENST00000578792 434 ntBASIC13.28□□□□□ -0.28
CTSBP07858 AP005264.5-201ENST00000590066 467 ntBASIC13.28□□□□□ -0.28
CTSBP07858 GMFG-209ENST00000600322 622 ntTSL 5 BASIC13.28□□□□□ -0.28
CTSBP07858 AL049840.2-201ENST00000602722 535 ntBASIC13.28□□□□□ -0.28
CTSBP07858 AC140113.1-201ENST00000603467 169 ntBASIC13.28□□□□□ -0.28
CTSBP07858 AP001065.2-201ENST00000617205 644 ntBASIC13.28□□□□□ -0.28
CTSBP07858 AC105137.3-201ENST00000617588 984 ntBASIC13.28□□□□□ -0.28
CTSBP07858 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC13.28□□□□□ -0.28
CTSBP07858 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.28□□□□□ -0.28
CTSBP07858 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.28□□□□□ -0.28
CTSBP07858 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CTSBP07858 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.28□□□□□ -0.28
CTSBP07858 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.28□□□□□ -0.28
CTSBP07858 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CTSBP07858 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CTSBP07858 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CTSBP07858 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC13.28□□□□□ -0.28
CTSBP07858 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.27□□□□□ -0.28
CTSBP07858 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CTSBP07858 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.27□□□□□ -0.28
CTSBP07858 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CTSBP07858 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CTSBP07858 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CTSBP07858 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CTSBP07858 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CTSBP07858 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
CTSBP07858 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC13.27□□□□□ -0.28
CTSBP07858 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CTSBP07858 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC13.27□□□□□ -0.29
CTSBP07858 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC13.27□□□□□ -0.29
CTSBP07858 AC005722.1-201ENST00000431878 964 ntBASIC13.27□□□□□ -0.29
CTSBP07858 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC13.27□□□□□ -0.29
CTSBP07858 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.27□□□□□ -0.29
CTSBP07858 RN7SKP155-201ENST00000516031 288 ntBASIC13.27□□□□□ -0.29
CTSBP07858 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC13.27□□□□□ -0.29
CTSBP07858 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.27□□□□□ -0.29
CTSBP07858 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CTSBP07858 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.27□□□□□ -0.29
CTSBP07858 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.27□□□□□ -0.29
CTSBP07858 PES1P2-201ENST00000449745 1735 ntBASIC13.27□□□□□ -0.29
CTSBP07858 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CTSBP07858 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.27□□□□□ -0.29
CTSBP07858 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CTSBP07858 AC072061.1-201ENST00000569710 2234 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms