Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFPL1O75677 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFPL1O75677 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFPL1O75677 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFPL1O75677 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC14.21□□□□□ -0.13
RFPL1O75677 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
RFPL1O75677 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.21□□□□□ -0.13
RFPL1O75677 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC14.21□□□□□ -0.13
RFPL1O75677 AC026271.4-201ENST00000578214 1833 ntBASIC14.21□□□□□ -0.13
RFPL1O75677 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RFPL1O75677 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFPL1O75677 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.21□□□□□ -0.13
RFPL1O75677 MIR663B-201ENST00000408361 115 ntBASIC14.21□□□□□ -0.13
RFPL1O75677 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.21□□□□□ -0.13
RFPL1O75677 AC079178.1-201ENST00000420915 656 ntBASIC14.21□□□□□ -0.13
RFPL1O75677 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.21□□□□□ -0.13
RFPL1O75677 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.21□□□□□ -0.13
RFPL1O75677 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.21□□□□□ -0.13
RFPL1O75677 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.21□□□□□ -0.13
RFPL1O75677 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.21□□□□□ -0.13
RFPL1O75677 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.21□□□□□ -0.13
RFPL1O75677 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.21□□□□□ -0.13
RFPL1O75677 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.21□□□□□ -0.13
RFPL1O75677 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RFPL1O75677 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RFPL1O75677 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.21□□□□□ -0.13
RFPL1O75677 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.21□□□□□ -0.13
RFPL1O75677 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.21□□□□□ -0.13
RFPL1O75677 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.21□□□□□ -0.13
RFPL1O75677 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.21□□□□□ -0.13
RFPL1O75677 DUX4L46-201ENST00000566845 751 ntBASIC14.21□□□□□ -0.13
RFPL1O75677 PPY2P-201ENST00000582808 702 ntBASIC14.21□□□□□ -0.13
RFPL1O75677 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
RFPL1O75677 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.21□□□□□ -0.13
RFPL1O75677 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
RFPL1O75677 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC14.21□□□□□ -0.14
RFPL1O75677 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RFPL1O75677 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC14.21□□□□□ -0.14
RFPL1O75677 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
RFPL1O75677 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
RFPL1O75677 MSNP1-201ENST00000511640 1732 ntBASIC14.21□□□□□ -0.14
RFPL1O75677 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.14
RFPL1O75677 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.21□□□□□ -0.14
RFPL1O75677 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
RFPL1O75677 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.2□□□□□ -0.14
RFPL1O75677 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RFPL1O75677 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.2□□□□□ -0.14
RFPL1O75677 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
RFPL1O75677 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.2□□□□□ -0.14
RFPL1O75677 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
RFPL1O75677 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RFPL1O75677 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RFPL1O75677 AC103592.1-201ENST00000394513 664 ntBASIC14.2□□□□□ -0.14
RFPL1O75677 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.2□□□□□ -0.14
RFPL1O75677 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.2□□□□□ -0.14
RFPL1O75677 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.2□□□□□ -0.14
RFPL1O75677 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.2□□□□□ -0.14
RFPL1O75677 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.2□□□□□ -0.14
RFPL1O75677 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.2□□□□□ -0.14
RFPL1O75677 AC124068.2-201ENST00000569473 1109 ntBASIC14.2□□□□□ -0.14
RFPL1O75677 MIR4783-201ENST00000580343 82 ntBASIC14.2□□□□□ -0.14
RFPL1O75677 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.2□□□□□ -0.14
RFPL1O75677 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.2□□□□□ -0.14
RFPL1O75677 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
RFPL1O75677 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC14.2□□□□□ -0.14
RFPL1O75677 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 POM121L14P-201ENST00000406100 1558 ntBASIC14.2□□□□□ -0.14
RFPL1O75677 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
RFPL1O75677 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.2□□□□□ -0.14
RFPL1O75677 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC14.2□□□□□ -0.14
RFPL1O75677 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RFPL1O75677 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
RFPL1O75677 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
RFPL1O75677 AC244394.1-201ENST00000435000 1665 ntBASIC14.2□□□□□ -0.14
RFPL1O75677 DLX4-206ENST00000611342 1662 ntBASIC14.2□□□□□ -0.14
RFPL1O75677 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms