Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 KRT18P13-201ENST00000400056 1290 ntBASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 HMGA1P1-201ENST00000415560 1062 ntBASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 MIR4469-201ENST00000583919 79 ntBASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 HSPA8P9-201ENST00000485881 1943 ntBASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 MESD-201ENST00000261758 4264 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TPRKBQ9Y3C4 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 TBX4-202ENST00000393853 3398 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 HNRNPA3P5-201ENST00000455201 833 ntBASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 KRT18P25-201ENST00000508931 1278 ntBASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 YBX1P5-201ENST00000509441 847 ntBASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 AC069120.2-201ENST00000524091 540 ntBASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.92□□□□□ -0.34
TPRKBQ9Y3C4 AC018445.4-201ENST00000624066 2291 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms