Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
COPS3Q9UNS2 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 BX324167.2-201ENST00000623717 3316 ntBASIC12.67□□□□□ -0.38
COPS3Q9UNS2 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.67□□□□□ -0.38
COPS3Q9UNS2 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 ABCD1P2-201ENST00000429313 1601 ntBASIC12.67□□□□□ -0.38
COPS3Q9UNS2 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 AP002761.4-201ENST00000565433 3361 ntBASIC12.67□□□□□ -0.38
COPS3Q9UNS2 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 AL355994.2-201ENST00000447882 704 ntBASIC12.67□□□□□ -0.38
COPS3Q9UNS2 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 CCT8L1P-201ENST00000465400 1674 ntBASIC12.67□□□□□ -0.38
COPS3Q9UNS2 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
COPS3Q9UNS2 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 AC006001.1-201ENST00000325130 474 ntBASIC12.66□□□□□ -0.38
COPS3Q9UNS2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 AC098614.1-201ENST00000368528 745 ntBASIC12.66□□□□□ -0.38
COPS3Q9UNS2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.66□□□□□ -0.38
COPS3Q9UNS2 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms