Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 COX5BP8-201ENST00000416911 349 ntBASIC15.03■□□□□ -0
CCDC50Q8IVM0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 DUX4L46-201ENST00000566845 751 ntBASIC15.03■□□□□ -0
CCDC50Q8IVM0 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.03■□□□□ -0
CCDC50Q8IVM0 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CCDC50Q8IVM0 AC005014.1-201ENST00000432006 2976 ntBASIC15.03■□□□□ -0
CCDC50Q8IVM0 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CCDC50Q8IVM0 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 LAP3P2-201ENST00000454686 1454 ntBASIC15.02■□□□□ -0
CCDC50Q8IVM0 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 AL645933.1-201ENST00000440087 609 ntBASIC15.02■□□□□ -0
CCDC50Q8IVM0 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 CROCCP4-201ENST00000457096 498 ntBASIC15.02■□□□□ -0
CCDC50Q8IVM0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CCDC50Q8IVM0 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.02■□□□□ -0
CCDC50Q8IVM0 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 PDIA3P1-201ENST00000471856 1510 ntBASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC50Q8IVM0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC50Q8IVM0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms