Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
EFNA3P52797 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.2□□□□□ -0.3
EFNA3P52797 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.2□□□□□ -0.3
EFNA3P52797 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.2□□□□□ -0.3
EFNA3P52797 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.2□□□□□ -0.3
EFNA3P52797 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
EFNA3P52797 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.19□□□□□ -0.3
EFNA3P52797 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.19□□□□□ -0.3
EFNA3P52797 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
EFNA3P52797 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 TCAM1P-207ENST00000485295 1537 ntBASIC13.19□□□□□ -0.3
EFNA3P52797 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.19□□□□□ -0.3
EFNA3P52797 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC13.19□□□□□ -0.3
EFNA3P52797 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
EFNA3P52797 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
EFNA3P52797 IL9RP3-201ENST00000442856 1674 ntBASIC13.19□□□□□ -0.3
EFNA3P52797 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.19□□□□□ -0.3
EFNA3P52797 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
EFNA3P52797 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.19□□□□□ -0.3
EFNA3P52797 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.19□□□□□ -0.3
EFNA3P52797 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
EFNA3P52797 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC13.19□□□□□ -0.3
EFNA3P52797 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.19□□□□□ -0.3
EFNA3P52797 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.19□□□□□ -0.3
EFNA3P52797 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.19□□□□□ -0.3
EFNA3P52797 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 RN7SL788P-201ENST00000460504 316 ntBASIC13.19□□□□□ -0.3
EFNA3P52797 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
EFNA3P52797 GOLGA2P8-201ENST00000505201 779 ntBASIC13.19□□□□□ -0.3
EFNA3P52797 SLC25A15P3-201ENST00000505530 290 ntBASIC13.19□□□□□ -0.3
EFNA3P52797 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC13.19□□□□□ -0.3
EFNA3P52797 MIR3180-2-201ENST00000581748 88 ntBASIC13.19□□□□□ -0.3
EFNA3P52797 MIR2392-201ENST00000584881 84 ntBASIC13.19□□□□□ -0.3
EFNA3P52797 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.19□□□□□ -0.3
EFNA3P52797 SIGLEC22P-201ENST00000599104 714 ntBASIC13.19□□□□□ -0.3
EFNA3P52797 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.19□□□□□ -0.3
EFNA3P52797 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC13.19□□□□□ -0.3
EFNA3P52797 AC011491.1-203ENST00000637688 543 ntBASIC13.19□□□□□ -0.3
EFNA3P52797 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.19□□□□□ -0.3
EFNA3P52797 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.19□□□□□ -0.3
EFNA3P52797 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC13.19□□□□□ -0.3
EFNA3P52797 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.19□□□□□ -0.3
EFNA3P52797 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.19□□□□□ -0.3
EFNA3P52797 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.19□□□□□ -0.3
EFNA3P52797 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
EFNA3P52797 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC13.18□□□□□ -0.3
EFNA3P52797 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
EFNA3P52797 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
EFNA3P52797 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.18□□□□□ -0.3
EFNA3P52797 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
EFNA3P52797 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC13.18□□□□□ -0.3
EFNA3P52797 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
EFNA3P52797 AC015909.5-201ENST00000624336 2266 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms