Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LINC00299-203ENST00000444688 537 ntTSL 4 BASIC8.39□□□□□ -1.07
APOBP04114 NDFIP2-AS1-201ENST00000457171 431 ntTSL 3 BASIC8.39□□□□□ -1.07
APOBP04114 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC8.39□□□□□ -1.07
APOBP04114 AC105424.1-201ENST00000514583 209 ntBASIC8.39□□□□□ -1.07
APOBP04114 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC8.39□□□□□ -1.07
APOBP04114 HIST1H4K-201ENST00000611927 312 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
APOBP04114 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
APOBP04114 CYP2B6-202ENST00000593831 1426 ntTSL 2 BASIC8.39□□□□□ -1.07
APOBP04114 RCC2P1-201ENST00000452257 1476 ntBASIC8.39□□□□□ -1.07
APOBP04114 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
APOBP04114 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
APOBP04114 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC8.39□□□□□ -1.07
APOBP04114 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
APOBP04114 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC8.39□□□□□ -1.07
APOBP04114 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
APOBP04114 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
APOBP04114 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
APOBP04114 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
APOBP04114 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
APOBP04114 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
APOBP04114 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
APOBP04114 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC8.39□□□□□ -1.07
APOBP04114 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
APOBP04114 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
APOBP04114 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
APOBP04114 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
APOBP04114 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
APOBP04114 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC8.39□□□□□ -1.07
APOBP04114 AC005822.1-201ENST00000414124 1034 ntBASIC8.39□□□□□ -1.07
APOBP04114 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
APOBP04114 SLC10A7-208ENST00000511374 869 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
APOBP04114 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC8.39□□□□□ -1.07
APOBP04114 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC8.39□□□□□ -1.07
APOBP04114 PXN-AS1-205ENST00000542314 707 ntTSL 2 BASIC8.39□□□□□ -1.07
APOBP04114 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC8.39□□□□□ -1.07
APOBP04114 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
APOBP04114 MARVELD3-205ENST00000567501 582 ntAPPRIS ALT2 TSL 3 BASIC8.39□□□□□ -1.07
APOBP04114 AC003965.2-201ENST00000577140 265 ntTSL 3 BASIC8.39□□□□□ -1.07
APOBP04114 RN7SL238P-201ENST00000613832 290 ntBASIC8.39□□□□□ -1.07
APOBP04114 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC8.39□□□□□ -1.07
APOBP04114 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC8.39□□□□□ -1.07
APOBP04114 RN7SL106P-201ENST00000618104 290 ntBASIC8.39□□□□□ -1.07
APOBP04114 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 FGD5P1-202ENST00000614866 2498 ntBASIC8.38□□□□□ -1.07
APOBP04114 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
APOBP04114 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 AL049542.1-201ENST00000430231 278 ntBASIC8.38□□□□□ -1.07
APOBP04114 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 AC104623.1-201ENST00000446357 546 ntTSL 4 BASIC8.38□□□□□ -1.07
APOBP04114 AL391822.1-201ENST00000452580 562 ntBASIC8.38□□□□□ -1.07
APOBP04114 AC025576.1-201ENST00000536455 462 ntTSL 5 BASIC8.38□□□□□ -1.07
APOBP04114 AL109983.1-201ENST00000603234 646 ntBASIC8.38□□□□□ -1.07
APOBP04114 AC092535.4-201ENST00000609548 397 ntBASIC8.38□□□□□ -1.07
APOBP04114 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC8.38□□□□□ -1.07
APOBP04114 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
APOBP04114 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 TUBB8-207ENST00000568866 1367 ntTSL 5 BASIC8.38□□□□□ -1.07
APOBP04114 AC124944.3-201ENST00000607976 1304 ntBASIC8.38□□□□□ -1.07
APOBP04114 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
APOBP04114 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 AC024475.2-201ENST00000312173 879 ntBASIC8.38□□□□□ -1.07
APOBP04114 AC004884.1-201ENST00000393647 319 ntBASIC8.38□□□□□ -1.07
APOBP04114 AC005077.3-201ENST00000449614 213 ntBASIC8.38□□□□□ -1.07
APOBP04114 KRTAP2-2-202ENST00000542910 390 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
APOBP04114 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC8.38□□□□□ -1.07
APOBP04114 Metazoa_SRP.64-201ENST00000611904 268 ntBASIC8.38□□□□□ -1.07
APOBP04114 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 AP002414.2-201ENST00000591780 3365 ntBASIC8.38□□□□□ -1.07
APOBP04114 AC126177.1-201ENST00000547829 2218 ntBASIC8.38□□□□□ -1.07
APOBP04114 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC8.38□□□□□ -1.07
APOBP04114 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
APOBP04114 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC8.38□□□□□ -1.07
APOBP04114 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
APOBP04114 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms