Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
CNOT4O95628 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.67□□□□□ -0.38
CNOT4O95628 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC12.67□□□□□ -0.38
CNOT4O95628 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 AC007614.4-201ENST00000564048 1827 ntBASIC12.67□□□□□ -0.38
CNOT4O95628 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CNOT4O95628 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
CNOT4O95628 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CNOT4O95628 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CNOT4O95628 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.66□□□□□ -0.38
CNOT4O95628 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.66□□□□□ -0.38
CNOT4O95628 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CNOT4O95628 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.66□□□□□ -0.38
CNOT4O95628 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CNOT4O95628 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CNOT4O95628 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.66□□□□□ -0.38
CNOT4O95628 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.66□□□□□ -0.38
CNOT4O95628 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 RNA5SP359-201ENST00000364838 113 ntBASIC12.66□□□□□ -0.38
CNOT4O95628 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 PDIA3P2-201ENST00000428073 158 ntBASIC12.66□□□□□ -0.38
CNOT4O95628 AC069218.1-201ENST00000435269 762 ntBASIC12.66□□□□□ -0.38
CNOT4O95628 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.66□□□□□ -0.38
CNOT4O95628 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.66□□□□□ -0.38
CNOT4O95628 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12.66□□□□□ -0.38
CNOT4O95628 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.66□□□□□ -0.38
CNOT4O95628 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.66□□□□□ -0.38
CNOT4O95628 AC242376.1-201ENST00000559033 726 ntBASIC12.66□□□□□ -0.38
CNOT4O95628 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.66□□□□□ -0.38
CNOT4O95628 AC093752.3-201ENST00000567343 901 ntBASIC12.66□□□□□ -0.38
CNOT4O95628 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.66□□□□□ -0.38
CNOT4O95628 AL022334.2-201ENST00000610000 484 ntBASIC12.66□□□□□ -0.38
CNOT4O95628 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CNOT4O95628 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.66□□□□□ -0.38
CNOT4O95628 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
CNOT4O95628 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.66□□□□□ -0.38
CNOT4O95628 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
CNOT4O95628 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
CNOT4O95628 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 BX640514.1-201ENST00000583223 1918 ntBASIC12.66□□□□□ -0.38
CNOT4O95628 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
CNOT4O95628 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.66□□□□□ -0.38
CNOT4O95628 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CNOT4O95628 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CNOT4O95628 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.65□□□□□ -0.38
CNOT4O95628 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.65□□□□□ -0.38
CNOT4O95628 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.65□□□□□ -0.38
CNOT4O95628 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
CNOT4O95628 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC12.65□□□□□ -0.38
CNOT4O95628 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.65□□□□□ -0.38
CNOT4O95628 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.65□□□□□ -0.38
CNOT4O95628 KRT18P15-201ENST00000458108 1291 ntBASIC12.65□□□□□ -0.38
CNOT4O95628 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.65□□□□□ -0.38
CNOT4O95628 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.65□□□□□ -0.38
CNOT4O95628 AC008723.1-201ENST00000506922 207 ntBASIC12.65□□□□□ -0.38
CNOT4O95628 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CNOT4O95628 CFL1-214ENST00000534769 758 ntTSL 2 BASIC12.65□□□□□ -0.38
CNOT4O95628 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC12.65□□□□□ -0.38
CNOT4O95628 IQSEC3P1-201ENST00000538799 536 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms