Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 ABCB10P4-201ENST00000566803 2184 ntBASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CLCA3PQ9Y6N3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CLCA3PQ9Y6N3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.16■□□□□ 0.98
CLCA3PQ9Y6N3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCA3PQ9Y6N3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.16■□□□□ 0.98
CLCA3PQ9Y6N3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.16■□□□□ 0.98
CLCA3PQ9Y6N3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.16■□□□□ 0.98
CLCA3PQ9Y6N3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCA3PQ9Y6N3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CLCA3PQ9Y6N3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCA3PQ9Y6N3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.15■□□□□ 0.98
CLCA3PQ9Y6N3 AC131281.2-201ENST00000520478 145 ntBASIC21.15■□□□□ 0.98
CLCA3PQ9Y6N3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CLCA3PQ9Y6N3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CLCA3PQ9Y6N3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.14■□□□□ 0.98
CLCA3PQ9Y6N3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CLCA3PQ9Y6N3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLCA3PQ9Y6N3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CLCA3PQ9Y6N3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.14■□□□□ 0.98
CLCA3PQ9Y6N3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CLCA3PQ9Y6N3 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
CLCA3PQ9Y6N3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCA3PQ9Y6N3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCA3PQ9Y6N3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCA3PQ9Y6N3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCA3PQ9Y6N3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CLCA3PQ9Y6N3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.14■□□□□ 0.97
CLCA3PQ9Y6N3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CLCA3PQ9Y6N3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CLCA3PQ9Y6N3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.14■□□□□ 0.97
CLCA3PQ9Y6N3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCA3PQ9Y6N3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCA3PQ9Y6N3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CLCA3PQ9Y6N3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCA3PQ9Y6N3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CLCA3PQ9Y6N3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CLCA3PQ9Y6N3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 AL512631.2-201ENST00000604634 923 ntBASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CLCA3PQ9Y6N3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA3PQ9Y6N3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA3PQ9Y6N3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA3PQ9Y6N3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA3PQ9Y6N3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.11■□□□□ 0.97
CLCA3PQ9Y6N3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA3PQ9Y6N3 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.11■□□□□ 0.97
CLCA3PQ9Y6N3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.11■□□□□ 0.97
CLCA3PQ9Y6N3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA3PQ9Y6N3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CLCA3PQ9Y6N3 AC009102.2-201ENST00000606772 1639 ntBASIC21.11■□□□□ 0.97
CLCA3PQ9Y6N3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCA3PQ9Y6N3 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CLCA3PQ9Y6N3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCA3PQ9Y6N3 AL136116.3-201ENST00000402907 1138 ntBASIC21.1■□□□□ 0.97
CLCA3PQ9Y6N3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.1■□□□□ 0.97
CLCA3PQ9Y6N3 MIR4466-201ENST00000606121 54 ntBASIC21.1■□□□□ 0.97
CLCA3PQ9Y6N3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCA3PQ9Y6N3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCA3PQ9Y6N3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.1■□□□□ 0.97
CLCA3PQ9Y6N3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CLCA3PQ9Y6N3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCA3PQ9Y6N3 SRD5A1P1-201ENST00000442297 786 ntBASIC21.09■□□□□ 0.97
CLCA3PQ9Y6N3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CLCA3PQ9Y6N3 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.09■□□□□ 0.97
CLCA3PQ9Y6N3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CLCA3PQ9Y6N3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCA3PQ9Y6N3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLCA3PQ9Y6N3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCA3PQ9Y6N3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CLCA3PQ9Y6N3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CLCA3PQ9Y6N3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.08■□□□□ 0.97
CLCA3PQ9Y6N3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms