Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
ZNF556Q9HAH1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF556Q9HAH1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZNF556Q9HAH1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.77■□□□□ 0.91
ZNF556Q9HAH1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF556Q9HAH1 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
ZNF556Q9HAH1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.77■□□□□ 0.91
ZNF556Q9HAH1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 GPX1-201ENST00000419349 1106 ntBASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
ZNF556Q9HAH1 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
ZNF556Q9HAH1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.74■□□□□ 0.91
ZNF556Q9HAH1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ZNF556Q9HAH1 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 ALDH1A3-203ENST00000557963 1670 ntBASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ZNF556Q9HAH1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 AC137767.1-201ENST00000602918 1920 ntBASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 AC087393.1-201ENST00000582896 145 ntBASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 ESRRAP2-201ENST00000418437 1549 ntBASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.71■□□□□ 0.91
ZNF556Q9HAH1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms