Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC29.58■■■□□ 2.33
PCDH11XQ9BZA7 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PCDH11XQ9BZA7 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC29.58■■■□□ 2.33
PCDH11XQ9BZA7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC29.58■■■□□ 2.33
PCDH11XQ9BZA7 MIR6084-201ENST00000622012 110 ntBASIC29.58■■■□□ 2.33
PCDH11XQ9BZA7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PCDH11XQ9BZA7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.58■■■□□ 2.33
PCDH11XQ9BZA7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
PCDH11XQ9BZA7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC29.57■■■□□ 2.32
PCDH11XQ9BZA7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC29.57■■■□□ 2.32
PCDH11XQ9BZA7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC29.57■■■□□ 2.32
PCDH11XQ9BZA7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC29.57■■■□□ 2.32
PCDH11XQ9BZA7 AL354811.1-201ENST00000610286 706 ntBASIC29.57■■■□□ 2.32
PCDH11XQ9BZA7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC29.57■■■□□ 2.32
PCDH11XQ9BZA7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC29.57■■■□□ 2.32
PCDH11XQ9BZA7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
PCDH11XQ9BZA7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC29.57■■■□□ 2.32
PCDH11XQ9BZA7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCDH11XQ9BZA7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
PCDH11XQ9BZA7 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC29.56■■■□□ 2.32
PCDH11XQ9BZA7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
PCDH11XQ9BZA7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC29.56■■■□□ 2.32
PCDH11XQ9BZA7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC29.56■■■□□ 2.32
PCDH11XQ9BZA7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC29.56■■■□□ 2.32
PCDH11XQ9BZA7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC29.56■■■□□ 2.32
PCDH11XQ9BZA7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
PCDH11XQ9BZA7 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
PCDH11XQ9BZA7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC29.55■■■□□ 2.32
PCDH11XQ9BZA7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC29.55■■■□□ 2.32
PCDH11XQ9BZA7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
PCDH11XQ9BZA7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC29.55■■■□□ 2.32
PCDH11XQ9BZA7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
PCDH11XQ9BZA7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 AL499627.2-201ENST00000606283 725 ntBASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
PCDH11XQ9BZA7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCDH11XQ9BZA7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC29.53■■■□□ 2.32
PCDH11XQ9BZA7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC29.53■■■□□ 2.32
PCDH11XQ9BZA7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC29.53■■■□□ 2.32
PCDH11XQ9BZA7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCDH11XQ9BZA7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC29.53■■■□□ 2.32
PCDH11XQ9BZA7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCDH11XQ9BZA7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
PCDH11XQ9BZA7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC29.52■■■□□ 2.32
PCDH11XQ9BZA7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
PCDH11XQ9BZA7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
PCDH11XQ9BZA7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC29.52■■■□□ 2.32
PCDH11XQ9BZA7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC29.51■■■□□ 2.32
PCDH11XQ9BZA7 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC29.51■■■□□ 2.32
PCDH11XQ9BZA7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.32
PCDH11XQ9BZA7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC29.51■■■□□ 2.32
PCDH11XQ9BZA7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC29.51■■■□□ 2.32
PCDH11XQ9BZA7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC29.51■■■□□ 2.32
PCDH11XQ9BZA7 OR2I1P-207ENST00000453522 948 ntBASIC29.51■■■□□ 2.32
PCDH11XQ9BZA7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC29.51■■■□□ 2.32
PCDH11XQ9BZA7 CCDC92B-201ENST00000575506 885 ntBASIC29.51■■■□□ 2.32
PCDH11XQ9BZA7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
PCDH11XQ9BZA7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
PCDH11XQ9BZA7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCDH11XQ9BZA7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC29.51■■■□□ 2.31
PCDH11XQ9BZA7 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDH11XQ9BZA7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC29.5■■■□□ 2.31
PCDH11XQ9BZA7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDH11XQ9BZA7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC29.5■■■□□ 2.31
PCDH11XQ9BZA7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC29.5■■■□□ 2.31
PCDH11XQ9BZA7 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDH11XQ9BZA7 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
PCDH11XQ9BZA7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDH11XQ9BZA7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDH11XQ9BZA7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
PCDH11XQ9BZA7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC29.49■■■□□ 2.31
PCDH11XQ9BZA7 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDH11XQ9BZA7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDH11XQ9BZA7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC29.49■■■□□ 2.31
PCDH11XQ9BZA7 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC29.49■■■□□ 2.31
PCDH11XQ9BZA7 AC010525.1-201ENST00000585559 441 ntBASIC29.49■■■□□ 2.31
PCDH11XQ9BZA7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDH11XQ9BZA7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
PCDH11XQ9BZA7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
PCDH11XQ9BZA7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
PCDH11XQ9BZA7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
PCDH11XQ9BZA7 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
PCDH11XQ9BZA7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC29.48■■■□□ 2.31
PCDH11XQ9BZA7 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC29.48■■■□□ 2.31
PCDH11XQ9BZA7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms