Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPENQ96T58 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.53■□□□□ 0.88
SPENQ96T58 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SPENQ96T58 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPENQ96T58 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPENQ96T58 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SPENQ96T58 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.52■□□□□ 0.88
SPENQ96T58 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SPENQ96T58 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.52■□□□□ 0.88
SPENQ96T58 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPENQ96T58 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SPENQ96T58 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.52■□□□□ 0.88
SPENQ96T58 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.52■□□□□ 0.88
SPENQ96T58 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPENQ96T58 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.52■□□□□ 0.88
SPENQ96T58 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPENQ96T58 pRNA.6-201ENST00000610482 90 ntBASIC20.52■□□□□ 0.88
SPENQ96T58 pRNA.5-201ENST00000612139 90 ntBASIC20.52■□□□□ 0.88
SPENQ96T58 pRNA.11-201ENST00000618423 90 ntBASIC20.52■□□□□ 0.88
SPENQ96T58 pRNA.13-201ENST00000619112 90 ntBASIC20.52■□□□□ 0.88
SPENQ96T58 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPENQ96T58 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SPENQ96T58 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPENQ96T58 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SPENQ96T58 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.51■□□□□ 0.87
SPENQ96T58 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.51■□□□□ 0.87
SPENQ96T58 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPENQ96T58 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPENQ96T58 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPENQ96T58 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.51■□□□□ 0.87
SPENQ96T58 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.51■□□□□ 0.87
SPENQ96T58 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPENQ96T58 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.5■□□□□ 0.87
SPENQ96T58 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SPENQ96T58 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPENQ96T58 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SPENQ96T58 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPENQ96T58 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SPENQ96T58 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.5■□□□□ 0.87
SPENQ96T58 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPENQ96T58 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPENQ96T58 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPENQ96T58 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPENQ96T58 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPENQ96T58 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPENQ96T58 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SPENQ96T58 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.49■□□□□ 0.87
SPENQ96T58 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPENQ96T58 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPENQ96T58 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.49■□□□□ 0.87
SPENQ96T58 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.49■□□□□ 0.87
SPENQ96T58 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPENQ96T58 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPENQ96T58 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPENQ96T58 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SPENQ96T58 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPENQ96T58 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPENQ96T58 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPENQ96T58 IGHV3-19-201ENST00000521488 291 ntBASIC20.48■□□□□ 0.87
SPENQ96T58 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPENQ96T58 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.48■□□□□ 0.87
SPENQ96T58 CROCCP5-201ENST00000436658 830 ntBASIC20.48■□□□□ 0.87
SPENQ96T58 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.48■□□□□ 0.87
SPENQ96T58 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPENQ96T58 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPENQ96T58 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.48■□□□□ 0.87
SPENQ96T58 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPENQ96T58 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPENQ96T58 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPENQ96T58 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SPENQ96T58 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SPENQ96T58 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPENQ96T58 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
SPENQ96T58 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.47■□□□□ 0.87
SPENQ96T58 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPENQ96T58 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SPENQ96T58 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.47■□□□□ 0.87
SPENQ96T58 AC012414.1-201ENST00000556676 535 ntBASIC20.47■□□□□ 0.87
SPENQ96T58 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.47■□□□□ 0.87
SPENQ96T58 MIR6084-201ENST00000622012 110 ntBASIC20.47■□□□□ 0.87
SPENQ96T58 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SPENQ96T58 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
SPENQ96T58 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
SPENQ96T58 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.46■□□□□ 0.87
SPENQ96T58 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.46■□□□□ 0.87
SPENQ96T58 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPENQ96T58 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPENQ96T58 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SPENQ96T58 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPENQ96T58 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SPENQ96T58 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.46■□□□□ 0.87
SPENQ96T58 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SPENQ96T58 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SPENQ96T58 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPENQ96T58 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SPENQ96T58 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.45■□□□□ 0.86
SPENQ96T58 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPENQ96T58 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SPENQ96T58 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SPENQ96T58 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms