Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
TIFAQ96CG3 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.34■■□□□ 1.49
TIFAQ96CG3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.34■■□□□ 1.49
TIFAQ96CG3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.34■■□□□ 1.49
TIFAQ96CG3 AL121749.1-202ENST00000609313 2153 ntBASIC24.33■■□□□ 1.49
TIFAQ96CG3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
TIFAQ96CG3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.49
TIFAQ96CG3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
TIFAQ96CG3 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
TIFAQ96CG3 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TIFAQ96CG3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
TIFAQ96CG3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
TIFAQ96CG3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.33■■□□□ 1.48
TIFAQ96CG3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.33■■□□□ 1.48
TIFAQ96CG3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TIFAQ96CG3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC24.32■■□□□ 1.48
TIFAQ96CG3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
TIFAQ96CG3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.32■■□□□ 1.48
TIFAQ96CG3 CD99P1-205ENST00000527459 561 ntBASIC24.32■■□□□ 1.48
TIFAQ96CG3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
TIFAQ96CG3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TIFAQ96CG3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.31■■□□□ 1.48
TIFAQ96CG3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.31■■□□□ 1.48
TIFAQ96CG3 KRT18P61-201ENST00000585825 1298 ntBASIC24.31■■□□□ 1.48
TIFAQ96CG3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TIFAQ96CG3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.31■■□□□ 1.48
TIFAQ96CG3 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
TIFAQ96CG3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.31■■□□□ 1.48
TIFAQ96CG3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
TIFAQ96CG3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.3■■□□□ 1.48
TIFAQ96CG3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.3■■□□□ 1.48
TIFAQ96CG3 BID-214ENST00000617586 542 ntTSL 5 BASIC24.3■■□□□ 1.48
TIFAQ96CG3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TIFAQ96CG3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.3■■□□□ 1.48
TIFAQ96CG3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
TIFAQ96CG3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TIFAQ96CG3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TIFAQ96CG3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.29■■□□□ 1.48
TIFAQ96CG3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.29■■□□□ 1.48
TIFAQ96CG3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TIFAQ96CG3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.29■■□□□ 1.48
TIFAQ96CG3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.29■■□□□ 1.48
TIFAQ96CG3 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TIFAQ96CG3 CROCCP5-201ENST00000436658 830 ntBASIC24.29■■□□□ 1.48
TIFAQ96CG3 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.29■■□□□ 1.48
TIFAQ96CG3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.29■■□□□ 1.48
TIFAQ96CG3 AP005435.1-201ENST00000529293 1178 ntBASIC24.29■■□□□ 1.48
TIFAQ96CG3 DBI-210ENST00000542275 757 ntTSL 5 BASIC24.29■■□□□ 1.48
TIFAQ96CG3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
TIFAQ96CG3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC24.29■■□□□ 1.48
TIFAQ96CG3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
TIFAQ96CG3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.29■■□□□ 1.48
TIFAQ96CG3 AC141586.4-201ENST00000624558 1573 ntBASIC24.29■■□□□ 1.48
TIFAQ96CG3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
TIFAQ96CG3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
TIFAQ96CG3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC24.28■■□□□ 1.48
TIFAQ96CG3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.28■■□□□ 1.48
TIFAQ96CG3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
TIFAQ96CG3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TIFAQ96CG3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TIFAQ96CG3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
TIFAQ96CG3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
TIFAQ96CG3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TIFAQ96CG3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.27■■□□□ 1.48
TIFAQ96CG3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.27■■□□□ 1.48
TIFAQ96CG3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TIFAQ96CG3 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TIFAQ96CG3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC24.27■■□□□ 1.48
TIFAQ96CG3 ERN1-208ENST00000606895 2068 ntBASIC24.26■■□□□ 1.47
TIFAQ96CG3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
TIFAQ96CG3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TIFAQ96CG3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.26■■□□□ 1.47
TIFAQ96CG3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TIFAQ96CG3 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TIFAQ96CG3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TIFAQ96CG3 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TIFAQ96CG3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TIFAQ96CG3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
TIFAQ96CG3 NCF1B-203ENST00000435988 1254 ntBASIC24.26■■□□□ 1.47
TIFAQ96CG3 TSPY20P-201ENST00000450910 630 ntBASIC24.26■■□□□ 1.47
TIFAQ96CG3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
TIFAQ96CG3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC24.26■■□□□ 1.47
TIFAQ96CG3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TIFAQ96CG3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.26■■□□□ 1.47
TIFAQ96CG3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TIFAQ96CG3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
TIFAQ96CG3 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.25■■□□□ 1.47
TIFAQ96CG3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
TIFAQ96CG3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.25■■□□□ 1.47
TIFAQ96CG3 AC091060.1-201ENST00000623524 1766 ntBASIC24.25■■□□□ 1.47
TIFAQ96CG3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TIFAQ96CG3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TIFAQ96CG3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TIFAQ96CG3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.25■■□□□ 1.47
TIFAQ96CG3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TIFAQ96CG3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
TIFAQ96CG3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.25■■□□□ 1.47
TIFAQ96CG3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TIFAQ96CG3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TIFAQ96CG3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms