Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VRK2Q86Y07 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
VRK2Q86Y07 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
VRK2Q86Y07 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VRK2Q86Y07 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC20.8■□□□□ 0.92
VRK2Q86Y07 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VRK2Q86Y07 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
VRK2Q86Y07 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
VRK2Q86Y07 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VRK2Q86Y07 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VRK2Q86Y07 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
VRK2Q86Y07 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
VRK2Q86Y07 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 C1orf229-201ENST00000623686 2258 ntBASIC20.79■□□□□ 0.92
VRK2Q86Y07 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
VRK2Q86Y07 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
VRK2Q86Y07 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VRK2Q86Y07 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VRK2Q86Y07 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
VRK2Q86Y07 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
VRK2Q86Y07 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
VRK2Q86Y07 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
VRK2Q86Y07 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
VRK2Q86Y07 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VRK2Q86Y07 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VRK2Q86Y07 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VRK2Q86Y07 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
VRK2Q86Y07 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VRK2Q86Y07 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.76■□□□□ 0.91
VRK2Q86Y07 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
VRK2Q86Y07 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
VRK2Q86Y07 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
VRK2Q86Y07 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
VRK2Q86Y07 AC021242.3-201ENST00000607598 1377 ntBASIC20.75■□□□□ 0.91
VRK2Q86Y07 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.75■□□□□ 0.91
VRK2Q86Y07 BX664725.1-201ENST00000438252 379 ntBASIC20.75■□□□□ 0.91
VRK2Q86Y07 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.75■□□□□ 0.91
VRK2Q86Y07 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
VRK2Q86Y07 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
VRK2Q86Y07 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VRK2Q86Y07 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRK2Q86Y07 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VRK2Q86Y07 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRK2Q86Y07 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRK2Q86Y07 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
VRK2Q86Y07 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRK2Q86Y07 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRK2Q86Y07 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRK2Q86Y07 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 RARRES2P1-201ENST00000474487 481 ntBASIC20.73■□□□□ 0.91
VRK2Q86Y07 AC233723.2-201ENST00000623798 2106 ntBASIC20.73■□□□□ 0.91
VRK2Q86Y07 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRK2Q86Y07 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRK2Q86Y07 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRK2Q86Y07 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRK2Q86Y07 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
VRK2Q86Y07 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
VRK2Q86Y07 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.72■□□□□ 0.91
VRK2Q86Y07 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
VRK2Q86Y07 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VRK2Q86Y07 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VRK2Q86Y07 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.72■□□□□ 0.91
VRK2Q86Y07 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VRK2Q86Y07 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms