Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 AL138724.1-201ENST00000606771 1088 ntBASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 AC144652.1-201ENST00000609974 1624 ntBASIC22.57■■□□□ 1.2
BRAT1Q6PJG6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 AC133561.4-201ENST00000566112 224 ntBASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 AL136162.1-201ENST00000607711 1078 ntBASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 AC106739.1-201ENST00000617035 715 ntBASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 AC135279.3-201ENST00000610945 1311 ntBASIC22.56■■□□□ 1.2
BRAT1Q6PJG6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BRAT1Q6PJG6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BRAT1Q6PJG6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BRAT1Q6PJG6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BRAT1Q6PJG6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
BRAT1Q6PJG6 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.55■■□□□ 1.2
BRAT1Q6PJG6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.55■■□□□ 1.2
BRAT1Q6PJG6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
BRAT1Q6PJG6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 SERBP1P1-201ENST00000396021 1160 ntBASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 AC006455.2-201ENST00000429931 906 ntBASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 PBX2P1-201ENST00000493219 1291 ntBASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
BRAT1Q6PJG6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
BRAT1Q6PJG6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BRAT1Q6PJG6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
BRAT1Q6PJG6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
BRAT1Q6PJG6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.53■■□□□ 1.2
BRAT1Q6PJG6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC22.53■■□□□ 1.2
BRAT1Q6PJG6 MIR638-201ENST00000385237 100 ntBASIC22.53■■□□□ 1.2
BRAT1Q6PJG6 AC011298.3-201ENST00000615796 283 ntBASIC22.53■■□□□ 1.2
BRAT1Q6PJG6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BRAT1Q6PJG6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.53■■□□□ 1.2
BRAT1Q6PJG6 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
BRAT1Q6PJG6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
BRAT1Q6PJG6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
BRAT1Q6PJG6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BRAT1Q6PJG6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
BRAT1Q6PJG6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
BRAT1Q6PJG6 LINC01529-204ENST00000636474 1715 ntBASIC22.52■■□□□ 1.2
BRAT1Q6PJG6 AC024257.2-201ENST00000549699 147 ntBASIC22.52■■□□□ 1.2
BRAT1Q6PJG6 DUX4L4-201ENST00000566884 1269 ntBASIC22.52■■□□□ 1.2
BRAT1Q6PJG6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
BRAT1Q6PJG6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
BRAT1Q6PJG6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
BRAT1Q6PJG6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BRAT1Q6PJG6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BRAT1Q6PJG6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BRAT1Q6PJG6 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
BRAT1Q6PJG6 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
BRAT1Q6PJG6 AC093323.1-202ENST00000635031 2045 ntBASIC22.51■■□□□ 1.19
BRAT1Q6PJG6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
BRAT1Q6PJG6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
BRAT1Q6PJG6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BRAT1Q6PJG6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BRAT1Q6PJG6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BRAT1Q6PJG6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.5■■□□□ 1.19
BRAT1Q6PJG6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
BRAT1Q6PJG6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.5■■□□□ 1.19
BRAT1Q6PJG6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
BRAT1Q6PJG6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.5■■□□□ 1.19
BRAT1Q6PJG6 MIR3181-201ENST00000578512 73 ntBASIC22.5■■□□□ 1.19
BRAT1Q6PJG6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.5■■□□□ 1.19
BRAT1Q6PJG6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.5■■□□□ 1.19
BRAT1Q6PJG6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.49■■□□□ 1.19
BRAT1Q6PJG6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BRAT1Q6PJG6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.49■■□□□ 1.19
BRAT1Q6PJG6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.49■■□□□ 1.19
BRAT1Q6PJG6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.49■■□□□ 1.19
BRAT1Q6PJG6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
BRAT1Q6PJG6 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.49■■□□□ 1.19
BRAT1Q6PJG6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms