Protein–RNA interactions for Protein: Q6P4R8

NFRKB, Nuclear factor related to kappa-B-binding protein, humanhuman

Predictions only

Length 1,299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFRKBQ6P4R8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NFRKBQ6P4R8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
NFRKBQ6P4R8 AC099791.1-201ENST00000416440 715 ntBASIC25.37■■□□□ 1.65
NFRKBQ6P4R8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
NFRKBQ6P4R8 PARL-206ENST00000435888 1098 ntTSL 5 BASIC25.37■■□□□ 1.65
NFRKBQ6P4R8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.37■■□□□ 1.65
NFRKBQ6P4R8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC25.37■■□□□ 1.65
NFRKBQ6P4R8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NFRKBQ6P4R8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
NFRKBQ6P4R8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NFRKBQ6P4R8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
NFRKBQ6P4R8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
NFRKBQ6P4R8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
NFRKBQ6P4R8 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NFRKBQ6P4R8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
NFRKBQ6P4R8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NFRKBQ6P4R8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NFRKBQ6P4R8 HLA-L-211ENST00000482052 1765 ntBASIC25.36■■□□□ 1.65
NFRKBQ6P4R8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
NFRKBQ6P4R8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 IRS3P-201ENST00000223076 1006 ntBASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 AC087623.3-201ENST00000607047 1098 ntBASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
NFRKBQ6P4R8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NFRKBQ6P4R8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
NFRKBQ6P4R8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NFRKBQ6P4R8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NFRKBQ6P4R8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
NFRKBQ6P4R8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NFRKBQ6P4R8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NFRKBQ6P4R8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NFRKBQ6P4R8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
NFRKBQ6P4R8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.33■■□□□ 1.65
NFRKBQ6P4R8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NFRKBQ6P4R8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
NFRKBQ6P4R8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.33■■□□□ 1.65
NFRKBQ6P4R8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
NFRKBQ6P4R8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC25.33■■□□□ 1.65
NFRKBQ6P4R8 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
NFRKBQ6P4R8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
NFRKBQ6P4R8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
NFRKBQ6P4R8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.32■■□□□ 1.64
NFRKBQ6P4R8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.32■■□□□ 1.64
NFRKBQ6P4R8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NFRKBQ6P4R8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NFRKBQ6P4R8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NFRKBQ6P4R8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.32■■□□□ 1.64
NFRKBQ6P4R8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NFRKBQ6P4R8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
NFRKBQ6P4R8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.32■■□□□ 1.64
NFRKBQ6P4R8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
NFRKBQ6P4R8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.31■■□□□ 1.64
NFRKBQ6P4R8 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NFRKBQ6P4R8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NFRKBQ6P4R8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
NFRKBQ6P4R8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.31■■□□□ 1.64
NFRKBQ6P4R8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.31■■□□□ 1.64
NFRKBQ6P4R8 AC233992.3-201ENST00000607491 485 ntBASIC25.31■■□□□ 1.64
NFRKBQ6P4R8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.31■■□□□ 1.64
NFRKBQ6P4R8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NFRKBQ6P4R8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.31■■□□□ 1.64
NFRKBQ6P4R8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.31■■□□□ 1.64
NFRKBQ6P4R8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.31■■□□□ 1.64
NFRKBQ6P4R8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NFRKBQ6P4R8 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NFRKBQ6P4R8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
NFRKBQ6P4R8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.3■■□□□ 1.64
NFRKBQ6P4R8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
NFRKBQ6P4R8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NFRKBQ6P4R8 AC006455.2-201ENST00000429931 906 ntBASIC25.3■■□□□ 1.64
NFRKBQ6P4R8 AL162430.1-201ENST00000480705 870 ntBASIC25.3■■□□□ 1.64
NFRKBQ6P4R8 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.3■■□□□ 1.64
NFRKBQ6P4R8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NFRKBQ6P4R8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
NFRKBQ6P4R8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NFRKBQ6P4R8 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NFRKBQ6P4R8 AL161729.1-201ENST00000604104 1402 ntBASIC25.29■■□□□ 1.64
NFRKBQ6P4R8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NFRKBQ6P4R8 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
NFRKBQ6P4R8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
NFRKBQ6P4R8 BX842568.3-201ENST00000418104 571 ntBASIC25.29■■□□□ 1.64
NFRKBQ6P4R8 MIR3181-201ENST00000578512 73 ntBASIC25.29■■□□□ 1.64
NFRKBQ6P4R8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
NFRKBQ6P4R8 AC009086.3-201ENST00000623486 1008 ntBASIC25.29■■□□□ 1.64
NFRKBQ6P4R8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms