Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
TMEM53Q6P2H8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TMEM53Q6P2H8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM53Q6P2H8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM53Q6P2H8 KRT18P24-201ENST00000344739 1156 ntBASIC20.39■□□□□ 0.85
TMEM53Q6P2H8 AC103834.1-201ENST00000520383 144 ntBASIC20.39■□□□□ 0.85
TMEM53Q6P2H8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.39■□□□□ 0.85
TMEM53Q6P2H8 AC120024.1-201ENST00000562672 995 ntBASIC20.39■□□□□ 0.85
TMEM53Q6P2H8 AC073130.3-201ENST00000624389 2278 ntBASIC20.39■□□□□ 0.85
TMEM53Q6P2H8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM53Q6P2H8 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM53Q6P2H8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TMEM53Q6P2H8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
TMEM53Q6P2H8 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.38■□□□□ 0.85
TMEM53Q6P2H8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM53Q6P2H8 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM53Q6P2H8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.38■□□□□ 0.85
TMEM53Q6P2H8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM53Q6P2H8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM53Q6P2H8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM53Q6P2H8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM53Q6P2H8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM53Q6P2H8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM53Q6P2H8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
TMEM53Q6P2H8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM53Q6P2H8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
TMEM53Q6P2H8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM53Q6P2H8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM53Q6P2H8 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.37■□□□□ 0.85
TMEM53Q6P2H8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
TMEM53Q6P2H8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM53Q6P2H8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.37■□□□□ 0.85
TMEM53Q6P2H8 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.37■□□□□ 0.85
TMEM53Q6P2H8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
TMEM53Q6P2H8 AL137060.1-201ENST00000618151 2648 ntBASIC20.37■□□□□ 0.85
TMEM53Q6P2H8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM53Q6P2H8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM53Q6P2H8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
TMEM53Q6P2H8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.36■□□□□ 0.85
TMEM53Q6P2H8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM53Q6P2H8 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.36■□□□□ 0.85
TMEM53Q6P2H8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM53Q6P2H8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
TMEM53Q6P2H8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
TMEM53Q6P2H8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TMEM53Q6P2H8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 AC103724.3-201ENST00000564481 992 ntBASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
TMEM53Q6P2H8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM53Q6P2H8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.34■□□□□ 0.85
TMEM53Q6P2H8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM53Q6P2H8 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
TMEM53Q6P2H8 AL031848.2-201ENST00000607670 837 ntBASIC20.34■□□□□ 0.85
TMEM53Q6P2H8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.34■□□□□ 0.85
TMEM53Q6P2H8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
TMEM53Q6P2H8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.33■□□□□ 0.85
TMEM53Q6P2H8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TMEM53Q6P2H8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM53Q6P2H8 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM53Q6P2H8 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM53Q6P2H8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM53Q6P2H8 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM53Q6P2H8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
TMEM53Q6P2H8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TMEM53Q6P2H8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
TMEM53Q6P2H8 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM53Q6P2H8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TMEM53Q6P2H8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
TMEM53Q6P2H8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.33■□□□□ 0.84
TMEM53Q6P2H8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 RARRES2P1-201ENST00000474487 481 ntBASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TMEM53Q6P2H8 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TMEM53Q6P2H8 DUSP8P3-201ENST00000399571 1760 ntBASIC20.31■□□□□ 0.84
TMEM53Q6P2H8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms