Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC40.45■■■■■ 4.07
HMGXB3Q12766 AC133637.1-201ENST00000624115 1537 ntBASIC40.45■■■■■ 4.07
HMGXB3Q12766 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC40.45■■■■■ 4.07
HMGXB3Q12766 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC40.45■■■■■ 4.07
HMGXB3Q12766 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC40.45■■■■■ 4.07
HMGXB3Q12766 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC40.44■■■■■ 4.07
HMGXB3Q12766 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC40.44■■■■■ 4.06
HMGXB3Q12766 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC40.44■■■■■ 4.06
HMGXB3Q12766 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC40.44■■■■■ 4.06
HMGXB3Q12766 CROCCP5-201ENST00000436658 830 ntBASIC40.44■■■■■ 4.06
HMGXB3Q12766 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC40.44■■■■■ 4.06
HMGXB3Q12766 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC40.44■■■■■ 4.06
HMGXB3Q12766 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC40.44■■■■■ 4.06
HMGXB3Q12766 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC40.44■■■■■ 4.06
HMGXB3Q12766 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC40.43■■■■■ 4.06
HMGXB3Q12766 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC40.43■■■■■ 4.06
HMGXB3Q12766 AL355802.2-201ENST00000402069 882 ntBASIC40.43■■■■■ 4.06
HMGXB3Q12766 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC40.43■■■■■ 4.06
HMGXB3Q12766 AP005435.1-201ENST00000529293 1178 ntBASIC40.43■■■■■ 4.06
HMGXB3Q12766 AC137761.2-201ENST00000561729 223 ntBASIC40.43■■■■■ 4.06
HMGXB3Q12766 AC145350.3-201ENST00000569033 163 ntBASIC40.43■■■■■ 4.06
HMGXB3Q12766 AL499627.2-201ENST00000606283 725 ntBASIC40.43■■■■■ 4.06
HMGXB3Q12766 WWOX-218ENST00000627394 894 ntTSL 5 BASIC40.43■■■■■ 4.06
HMGXB3Q12766 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC40.43■■■■■ 4.06
HMGXB3Q12766 AL161729.1-201ENST00000604104 1402 ntBASIC40.43■■■■■ 4.06
HMGXB3Q12766 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC40.42■■■■■ 4.06
HMGXB3Q12766 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC40.42■■■■■ 4.06
HMGXB3Q12766 MAP2K4P1-201ENST00000438453 1195 ntBASIC40.42■■■■■ 4.06
HMGXB3Q12766 DBI-210ENST00000542275 757 ntTSL 5 BASIC40.42■■■■■ 4.06
HMGXB3Q12766 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC40.42■■■■■ 4.06
HMGXB3Q12766 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC40.42■■■■■ 4.06
HMGXB3Q12766 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC40.42■■■■■ 4.06
HMGXB3Q12766 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC40.42■■■■■ 4.06
HMGXB3Q12766 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC40.42■■■■■ 4.06
HMGXB3Q12766 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC40.42■■■■■ 4.06
HMGXB3Q12766 STX7-201ENST00000367937 1090 ntTSL 5 BASIC40.42■■■■■ 4.06
HMGXB3Q12766 AC016769.1-201ENST00000409132 1010 ntBASIC40.42■■■■■ 4.06
HMGXB3Q12766 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC40.42■■■■■ 4.06
HMGXB3Q12766 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC40.41■■■■■ 4.06
HMGXB3Q12766 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC40.41■■■■■ 4.06
HMGXB3Q12766 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC40.41■■■■■ 4.06
HMGXB3Q12766 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC40.41■■■■■ 4.06
HMGXB3Q12766 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC40.41■■■■■ 4.06
HMGXB3Q12766 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC40.41■■■■■ 4.06
HMGXB3Q12766 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC40.41■■■■■ 4.06
HMGXB3Q12766 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC40.4■■■■■ 4.06
HMGXB3Q12766 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC40.4■■■■■ 4.06
HMGXB3Q12766 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC40.4■■■■■ 4.06
HMGXB3Q12766 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC40.4■■■■■ 4.06
HMGXB3Q12766 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC40.39■■■■■ 4.06
HMGXB3Q12766 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC40.39■■■■■ 4.06
HMGXB3Q12766 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC40.39■■■■■ 4.06
HMGXB3Q12766 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC40.39■■■■■ 4.06
HMGXB3Q12766 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC40.39■■■■■ 4.06
HMGXB3Q12766 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC40.39■■■■■ 4.06
HMGXB3Q12766 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC40.38■■■■■ 4.06
HMGXB3Q12766 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC40.38■■■■■ 4.06
HMGXB3Q12766 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC40.38■■■■■ 4.06
HMGXB3Q12766 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC40.38■■■■■ 4.05
HMGXB3Q12766 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC40.38■■■■■ 4.05
HMGXB3Q12766 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC40.37■■■■■ 4.05
HMGXB3Q12766 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC40.37■■■■■ 4.05
HMGXB3Q12766 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC40.37■■■■■ 4.05
HMGXB3Q12766 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC40.37■■■■■ 4.05
HMGXB3Q12766 GALNS-213ENST00000569433 723 ntTSL 3 BASIC40.37■■■■■ 4.05
HMGXB3Q12766 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC40.36■■■■■ 4.05
HMGXB3Q12766 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC40.36■■■■■ 4.05
HMGXB3Q12766 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC40.35■■■■■ 4.05
HMGXB3Q12766 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC40.35■■■■■ 4.05
HMGXB3Q12766 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC40.35■■■■■ 4.05
HMGXB3Q12766 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC40.35■■■■■ 4.05
HMGXB3Q12766 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC40.35■■■■■ 4.05
HMGXB3Q12766 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC40.35■■■■■ 4.05
HMGXB3Q12766 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC40.35■■■■■ 4.05
HMGXB3Q12766 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC40.35■■■■■ 4.05
HMGXB3Q12766 AC091060.1-201ENST00000623524 1766 ntBASIC40.35■■■■■ 4.05
HMGXB3Q12766 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC40.34■■■■■ 4.05
HMGXB3Q12766 NCF1B-203ENST00000435988 1254 ntBASIC40.34■■■■■ 4.05
HMGXB3Q12766 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC40.34■■■■■ 4.05
HMGXB3Q12766 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC40.33■■■■■ 4.05
HMGXB3Q12766 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
HMGXB3Q12766 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC40.33■■■■■ 4.05
HMGXB3Q12766 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
HMGXB3Q12766 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC40.33■■■■■ 4.05
HMGXB3Q12766 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC40.33■■■■■ 4.05
HMGXB3Q12766 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC40.33■■■■■ 4.05
HMGXB3Q12766 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC40.33■■■■■ 4.05
HMGXB3Q12766 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC40.33■■■■■ 4.05
HMGXB3Q12766 MIR663A-201ENST00000385250 93 ntBASIC40.32■■■■■ 4.05
HMGXB3Q12766 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC40.32■■■■■ 4.05
HMGXB3Q12766 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC40.32■■■■■ 4.05
HMGXB3Q12766 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC40.32■■■■■ 4.05
HMGXB3Q12766 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC40.32■■■■■ 4.04
HMGXB3Q12766 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC40.32■■■■■ 4.04
HMGXB3Q12766 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC40.31■■■■■ 4.04
HMGXB3Q12766 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC40.31■■■■■ 4.04
HMGXB3Q12766 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC40.31■■■■■ 4.04
HMGXB3Q12766 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC40.31■■■■■ 4.04
HMGXB3Q12766 SLC6A10P-202ENST00000431994 2058 ntBASIC40.31■■■■■ 4.04
HMGXB3Q12766 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC40.31■■■■■ 4.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms