Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CFHR3Q02985 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.59■□□□□ 0.41
CFHR3Q02985 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CFHR3Q02985 AC096631.2-201ENST00000436136 790 ntBASIC17.59■□□□□ 0.41
CFHR3Q02985 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.59■□□□□ 0.41
CFHR3Q02985 AC110285.6-201ENST00000617652 491 ntBASIC17.59■□□□□ 0.41
CFHR3Q02985 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.59■□□□□ 0.41
CFHR3Q02985 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CFHR3Q02985 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CFHR3Q02985 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CFHR3Q02985 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CFHR3Q02985 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CFHR3Q02985 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.58■□□□□ 0.4
CFHR3Q02985 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CFHR3Q02985 NALT1-201ENST00000429224 738 ntTSL 5 BASIC17.58■□□□□ 0.4
CFHR3Q02985 DUX4L19-201ENST00000557448 1267 ntBASIC17.58■□□□□ 0.4
CFHR3Q02985 AL139246.5-201ENST00000606645 996 ntBASIC17.58■□□□□ 0.4
CFHR3Q02985 AC093323.1-202ENST00000635031 2045 ntBASIC17.58■□□□□ 0.4
CFHR3Q02985 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFHR3Q02985 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CFHR3Q02985 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.58■□□□□ 0.4
CFHR3Q02985 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
CFHR3Q02985 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFHR3Q02985 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CFHR3Q02985 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFHR3Q02985 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFHR3Q02985 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.57■□□□□ 0.4
CFHR3Q02985 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.57■□□□□ 0.4
CFHR3Q02985 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CFHR3Q02985 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFHR3Q02985 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFHR3Q02985 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CFHR3Q02985 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC17.57■□□□□ 0.4
CFHR3Q02985 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFHR3Q02985 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFHR3Q02985 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFHR3Q02985 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFHR3Q02985 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFHR3Q02985 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFHR3Q02985 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CFHR3Q02985 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFHR3Q02985 UNC93B3-201ENST00000308076 687 ntBASIC17.56■□□□□ 0.4
CFHR3Q02985 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.56■□□□□ 0.4
CFHR3Q02985 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFHR3Q02985 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.56■□□□□ 0.4
CFHR3Q02985 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CFHR3Q02985 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CFHR3Q02985 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.56■□□□□ 0.4
CFHR3Q02985 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFHR3Q02985 FP325331.1-202ENST00000623531 1380 ntBASIC17.55■□□□□ 0.4
CFHR3Q02985 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFHR3Q02985 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CFHR3Q02985 AC144652.1-201ENST00000609974 1624 ntBASIC17.55■□□□□ 0.4
CFHR3Q02985 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFHR3Q02985 AC006455.2-201ENST00000429931 906 ntBASIC17.55■□□□□ 0.4
CFHR3Q02985 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CFHR3Q02985 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CFHR3Q02985 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.55■□□□□ 0.4
CFHR3Q02985 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.55■□□□□ 0.4
CFHR3Q02985 AC009086.3-201ENST00000623486 1008 ntBASIC17.55■□□□□ 0.4
CFHR3Q02985 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CFHR3Q02985 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CFHR3Q02985 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFHR3Q02985 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFHR3Q02985 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFHR3Q02985 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.54■□□□□ 0.4
CFHR3Q02985 SYT6-210ENST00000641643 1587 ntBASIC17.54■□□□□ 0.4
CFHR3Q02985 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.54■□□□□ 0.4
CFHR3Q02985 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFHR3Q02985 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFHR3Q02985 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFHR3Q02985 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CFHR3Q02985 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFHR3Q02985 SERBP1P1-201ENST00000396021 1160 ntBASIC17.54■□□□□ 0.4
CFHR3Q02985 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.54■□□□□ 0.4
CFHR3Q02985 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CFHR3Q02985 AL138724.1-201ENST00000606771 1088 ntBASIC17.54■□□□□ 0.4
CFHR3Q02985 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.54■□□□□ 0.4
CFHR3Q02985 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CFHR3Q02985 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.54■□□□□ 0.4
CFHR3Q02985 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CFHR3Q02985 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFHR3Q02985 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFHR3Q02985 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.53■□□□□ 0.4
CFHR3Q02985 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CFHR3Q02985 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.53■□□□□ 0.4
CFHR3Q02985 AL136162.1-201ENST00000607711 1078 ntBASIC17.53■□□□□ 0.4
CFHR3Q02985 AC106739.1-201ENST00000617035 715 ntBASIC17.53■□□□□ 0.4
CFHR3Q02985 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFHR3Q02985 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CFHR3Q02985 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CFHR3Q02985 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CFHR3Q02985 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.52■□□□□ 0.4
CFHR3Q02985 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CFHR3Q02985 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CFHR3Q02985 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CFHR3Q02985 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CFHR3Q02985 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CFHR3Q02985 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CFHR3Q02985 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms