Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 NBP2YDR162C 711 nt6.03□□□□□ -1.44 RIP-Chip
UBP3Q01477 RNH202YDR279W 1053 nt6.03□□□□□ -1.44
UBP3Q01477 YHR193C-AYHR193C-A 375 nt6.03□□□□□ -1.44
UBP3Q01477 LST8YNL006W 912 nt6.03□□□□□ -1.44
UBP3Q01477 YOL131WYOL131W 327 nt6.03□□□□□ -1.44
UBP3Q01477 ARR3YPR201W 1215 nt6.03□□□□□ -1.44
UBP3Q01477 VBA1YMR088C 1689 nt6.03□□□□□ -1.44
UBP3Q01477 CEG1YGL130W 1380 nt6.03□□□□□ -1.44
UBP3Q01477 MID1YNL291C 1647 nt6.03□□□□□ -1.44
UBP3Q01477 MAK11YKL021C 1407 nt6.02□□□□□ -1.45 RIP-Chip
UBP3Q01477 DCV1YFR012W 609 nt6.02□□□□□ -1.45
UBP3Q01477 PEX14YGL153W 1026 nt6.02□□□□□ -1.45
UBP3Q01477 YGL199CYGL199C 471 nt6.02□□□□□ -1.45
UBP3Q01477 GTT1YIR038C 705 nt6.02□□□□□ -1.45
UBP3Q01477 RPC25YKL144C 639 nt6.02□□□□□ -1.45
UBP3Q01477 CSR1YLR380W 1227 nt6.02□□□□□ -1.45
UBP3Q01477 VPS71YML041C 843 nt6.02□□□□□ -1.45
UBP3Q01477 TAF3YPL011C 1062 nt6.02□□□□□ -1.45 RIP-Chip
UBP3Q01477 CSH1YBR161W 1131 nt6.02□□□□□ -1.45
UBP3Q01477 MED8YBR193C 672 nt6.02□□□□□ -1.45
UBP3Q01477 WTM2YOR229W 1404 nt6.01□□□□□ -1.45
UBP3Q01477 BUL1YMR275C 2931 nt6.01□□□□□ -1.45
UBP3Q01477 OCT1YKL134C 2319 nt6.01□□□□□ -1.45
UBP3Q01477 NUP42YDR192C 1293 nt6.01□□□□□ -1.45
UBP3Q01477 SYF2YGR129W 648 nt6.01□□□□□ -1.45
UBP3Q01477 BGL2YGR282C 942 nt6.01□□□□□ -1.45
UBP3Q01477 YJL156W-AYJL156W-A 222 nt6.01□□□□□ -1.45
UBP3Q01477 RFC2YJR068W 1062 nt6.01□□□□□ -1.45
UBP3Q01477 MRP17YKL003C 396 nt6.01□□□□□ -1.45
UBP3Q01477 CMC1YKL137W 336 nt6.01□□□□□ -1.45
UBP3Q01477 IRC25YLR021W 540 nt6.01□□□□□ -1.45
UBP3Q01477 YLR363W-AYLR363W-A 258 nt6.01□□□□□ -1.45
UBP3Q01477 RAD10YML095C 633 nt6.01□□□□□ -1.45
UBP3Q01477 HEK2YBL032W 1146 nt6.01□□□□□ -1.45
UBP3Q01477 COG5YNL051W 1212 nt6.01□□□□□ -1.45
UBP3Q01477 MRPL22YNL177C 930 nt6.01□□□□□ -1.45
UBP3Q01477 RFM1YOR279C 933 nt6.01□□□□□ -1.45
UBP3Q01477 ATP20YPR020W 348 nt6.01□□□□□ -1.45
UBP3Q01477 VPS70YJR126C 2436 nt6.01□□□□□ -1.45
UBP3Q01477 FBP26YJL155C 1359 nt6.01□□□□□ -1.45
UBP3Q01477 UBP8YMR223W 1416 nt6□□□□□ -1.45
UBP3Q01477 VAC17YCL063W 1272 nt6□□□□□ -1.45
UBP3Q01477 snR56snR56 88 nt6□□□□□ -1.45
UBP3Q01477 YGR219WYGR219W 342 nt6□□□□□ -1.45
UBP3Q01477 YHB1YGR234W 1200 nt6□□□□□ -1.45
UBP3Q01477 RPC17YJL011C 486 nt6□□□□□ -1.45
UBP3Q01477 YKR051WYKR051W 1257 nt6□□□□□ -1.45 RIP-Chip
UBP3Q01477 YLR156WYLR156W 345 nt6□□□□□ -1.45
UBP3Q01477 YLR157W-DYLR157W-D 213 nt6□□□□□ -1.45
UBP3Q01477 YLR159WYLR159W 345 nt6□□□□□ -1.45
UBP3Q01477 YLR161WYLR161W 345 nt6□□□□□ -1.45 RIP-Chip
UBP3Q01477 YNR075C-AYNR075C-A 93 nt6□□□□□ -1.45
UBP3Q01477 BBP1YPL255W 1158 nt6□□□□□ -1.45
UBP3Q01477 YPR071WYPR071W 636 nt6□□□□□ -1.45
UBP3Q01477 DFG5YMR238W 1377 nt6□□□□□ -1.45
UBP3Q01477 YBR139WYBR139W 1527 nt5.99□□□□□ -1.45
UBP3Q01477 IME4YGL192W 1803 nt5.99□□□□□ -1.45
UBP3Q01477 BUD8YLR353W 1812 nt5.99□□□□□ -1.45 RIP-Chip
UBP3Q01477 ECM3YOR092W 1842 nt5.99□□□□□ -1.45
UBP3Q01477 BMH1YER177W 804 nt5.99□□□□□ -1.45 RIP-Chip
UBP3Q01477 ACT1YFL039C 1128 nt5.99□□□□□ -1.45
UBP3Q01477 SNZ3YFL059W 897 nt5.99□□□□□ -1.45
UBP3Q01477 KEG1YFR042W 603 nt5.99□□□□□ -1.45
UBP3Q01477 SPC2YML055W 537 nt5.99□□□□□ -1.45
UBP3Q01477 TEX1YNL253W 1269 nt5.99□□□□□ -1.45
UBP3Q01477 SNZ2YNL333W 897 nt5.99□□□□□ -1.45
UBP3Q01477 RPB8YOR224C 441 nt5.99□□□□□ -1.45
UBP3Q01477 ACF2YLR144C 2340 nt5.99□□□□□ -1.45
UBP3Q01477 CAB3YKL088W 1716 nt5.99□□□□□ -1.45
UBP3Q01477 UGA1YGR019W 1416 nt5.99□□□□□ -1.45
UBP3Q01477 NGR1YBR212W 2019 nt5.98□□□□□ -1.45
UBP3Q01477 IDP1YDL066W 1287 nt5.98□□□□□ -1.45 RIP-Chip
UBP3Q01477 YGR079WYGR079W 1113 nt5.98□□□□□ -1.45 RIP-Chip
UBP3Q01477 SMD3YLR147C 306 nt5.98□□□□□ -1.45
UBP3Q01477 YLR222C-AYLR222C-A 231 nt5.98□□□□□ -1.45
UBP3Q01477 NIT3YLR351C 876 nt5.98□□□□□ -1.45
UBP3Q01477 REH1YLR387C 1299 nt5.98□□□□□ -1.45
UBP3Q01477 HMS1YOR032C 1305 nt5.98□□□□□ -1.45
UBP3Q01477 ALG1YBR110W 1350 nt5.97□□□□□ -1.45
UBP3Q01477 YDL124WYDL124W 939 nt5.97□□□□□ -1.45 RIP-Chip
UBP3Q01477 YDL172CYDL172C 480 nt5.97□□□□□ -1.45
UBP3Q01477 YGR022CYGR022C 330 nt5.97□□□□□ -1.45
UBP3Q01477 YMR084WYMR084W 789 nt5.97□□□□□ -1.45
UBP3Q01477 GLO4YOR040W 858 nt5.97□□□□□ -1.45
UBP3Q01477 APM2YHL019C 1818 nt5.97□□□□□ -1.45
UBP3Q01477 HSF1YGL073W 2502 nt5.96□□□□□ -1.45
UBP3Q01477 YGL214WYGL214W 486 nt5.96□□□□□ -1.46
UBP3Q01477 BTN2YGR142W 1233 nt5.96□□□□□ -1.46
UBP3Q01477 SIC1YLR079W 855 nt5.96□□□□□ -1.46
UBP3Q01477 DCN1YLR128W 810 nt5.96□□□□□ -1.46
UBP3Q01477 RPS10BYMR230W 318 nt5.96□□□□□ -1.46 RIP-Chip
UBP3Q01477 FYV6YNL133C 522 nt5.96□□□□□ -1.46
UBP3Q01477 YBR230W-AYBR230W-A 201 nt5.96□□□□□ -1.46
UBP3Q01477 YCL041CYCL041C 495 nt5.96□□□□□ -1.46
UBP3Q01477 ARN2YHL047C 1863 nt5.96□□□□□ -1.46 RIP-Chip
UBP3Q01477 PRM7YDL039C 2097 nt5.95□□□□□ -1.46
UBP3Q01477 MDL1YLR188W 2088 nt5.95□□□□□ -1.46
UBP3Q01477 CWC21YDR482C 408 nt5.95□□□□□ -1.46
UBP3Q01477 RPT6YGL048C 1218 nt5.95□□□□□ -1.46
UBP3Q01477 PFA3YNL326C 1011 nt5.95□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 21.6 ms