Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
EPHA4P54764 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
EPHA4P54764 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.73■■□□□ 1.07
EPHA4P54764 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.73■■□□□ 1.07
EPHA4P54764 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.73■■□□□ 1.07
EPHA4P54764 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.73■■□□□ 1.07
EPHA4P54764 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.73■■□□□ 1.07
EPHA4P54764 pRNA.6-201ENST00000610482 90 ntBASIC21.73■■□□□ 1.07
EPHA4P54764 CA15P2-201ENST00000611168 834 ntBASIC21.73■■□□□ 1.07
EPHA4P54764 pRNA.5-201ENST00000612139 90 ntBASIC21.73■■□□□ 1.07
EPHA4P54764 pRNA.11-201ENST00000618423 90 ntBASIC21.73■■□□□ 1.07
EPHA4P54764 pRNA.13-201ENST00000619112 90 ntBASIC21.73■■□□□ 1.07
EPHA4P54764 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EPHA4P54764 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
EPHA4P54764 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
EPHA4P54764 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
EPHA4P54764 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.73■■□□□ 1.07
EPHA4P54764 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA4P54764 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA4P54764 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.72■■□□□ 1.07
EPHA4P54764 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.72■■□□□ 1.07
EPHA4P54764 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA4P54764 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA4P54764 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA4P54764 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.72■■□□□ 1.07
EPHA4P54764 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
EPHA4P54764 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA4P54764 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA4P54764 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA4P54764 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
EPHA4P54764 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
EPHA4P54764 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA4P54764 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA4P54764 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.71■■□□□ 1.07
EPHA4P54764 BX842568.3-201ENST00000418104 571 ntBASIC21.71■■□□□ 1.07
EPHA4P54764 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.71■■□□□ 1.07
EPHA4P54764 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.71■■□□□ 1.07
EPHA4P54764 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA4P54764 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
EPHA4P54764 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.71■■□□□ 1.07
EPHA4P54764 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.71■■□□□ 1.07
EPHA4P54764 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA4P54764 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA4P54764 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
EPHA4P54764 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA4P54764 FP325331.1-202ENST00000623531 1380 ntBASIC21.71■■□□□ 1.07
EPHA4P54764 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.71■■□□□ 1.07
EPHA4P54764 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA4P54764 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
EPHA4P54764 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA4P54764 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA4P54764 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA4P54764 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA4P54764 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.7■■□□□ 1.06
EPHA4P54764 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA4P54764 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.7■■□□□ 1.06
EPHA4P54764 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.7■■□□□ 1.06
EPHA4P54764 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA4P54764 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.7■■□□□ 1.06
EPHA4P54764 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.7■■□□□ 1.06
EPHA4P54764 AC008764.7-201ENST00000593779 1081 ntBASIC21.7■■□□□ 1.06
EPHA4P54764 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA4P54764 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
EPHA4P54764 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA4P54764 LINC00543-201ENST00000567234 1845 ntBASIC21.69■■□□□ 1.06
EPHA4P54764 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA4P54764 AC099791.1-201ENST00000416440 715 ntBASIC21.69■■□□□ 1.06
EPHA4P54764 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.69■■□□□ 1.06
EPHA4P54764 AC233992.3-201ENST00000607491 485 ntBASIC21.69■■□□□ 1.06
EPHA4P54764 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA4P54764 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.69■■□□□ 1.06
EPHA4P54764 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
EPHA4P54764 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA4P54764 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA4P54764 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
EPHA4P54764 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.69■■□□□ 1.06
EPHA4P54764 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
EPHA4P54764 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
EPHA4P54764 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.68■■□□□ 1.06
EPHA4P54764 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EPHA4P54764 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EPHA4P54764 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.68■■□□□ 1.06
EPHA4P54764 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
EPHA4P54764 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.68■■□□□ 1.06
EPHA4P54764 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EPHA4P54764 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
EPHA4P54764 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
EPHA4P54764 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.68■■□□□ 1.06
EPHA4P54764 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHA4P54764 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EPHA4P54764 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EPHA4P54764 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
EPHA4P54764 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
EPHA4P54764 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.67■■□□□ 1.06
EPHA4P54764 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.67■■□□□ 1.06
EPHA4P54764 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.67■■□□□ 1.06
EPHA4P54764 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
EPHA4P54764 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.67■■□□□ 1.06
EPHA4P54764 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.67■■□□□ 1.06
EPHA4P54764 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms