Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.67■□□□□ 0.74
UBCP0CG48 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
UBCP0CG48 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBCP0CG48 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBCP0CG48 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBCP0CG48 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
UBCP0CG48 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBCP0CG48 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBCP0CG48 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.66■□□□□ 0.74
UBCP0CG48 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBCP0CG48 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBCP0CG48 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBCP0CG48 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
UBCP0CG48 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.66■□□□□ 0.74
UBCP0CG48 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.66■□□□□ 0.74
UBCP0CG48 THA1P-201ENST00000590384 1145 ntBASIC19.66■□□□□ 0.74
UBCP0CG48 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
UBCP0CG48 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
UBCP0CG48 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.66■□□□□ 0.74
UBCP0CG48 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.66■□□□□ 0.74
UBCP0CG48 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBCP0CG48 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
UBCP0CG48 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBCP0CG48 KRT18P24-201ENST00000344739 1156 ntBASIC19.65■□□□□ 0.74
UBCP0CG48 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.65■□□□□ 0.74
UBCP0CG48 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.65■□□□□ 0.74
UBCP0CG48 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.65■□□□□ 0.74
UBCP0CG48 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBCP0CG48 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
UBCP0CG48 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.65■□□□□ 0.74
UBCP0CG48 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBCP0CG48 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
UBCP0CG48 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
UBCP0CG48 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
UBCP0CG48 MIR4281-201ENST00000580852 62 ntBASIC19.64■□□□□ 0.73
UBCP0CG48 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
UBCP0CG48 AF131216.4-201ENST00000638924 1588 ntBASIC19.64■□□□□ 0.73
UBCP0CG48 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBCP0CG48 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
UBCP0CG48 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.64■□□□□ 0.73
UBCP0CG48 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
UBCP0CG48 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBCP0CG48 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
UBCP0CG48 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBCP0CG48 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBCP0CG48 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBCP0CG48 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.63■□□□□ 0.73
UBCP0CG48 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBCP0CG48 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
UBCP0CG48 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.63■□□□□ 0.73
UBCP0CG48 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBCP0CG48 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
UBCP0CG48 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBCP0CG48 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
UBCP0CG48 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
UBCP0CG48 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.62■□□□□ 0.73
UBCP0CG48 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBCP0CG48 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBCP0CG48 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
UBCP0CG48 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.62■□□□□ 0.73
UBCP0CG48 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBCP0CG48 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBCP0CG48 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBCP0CG48 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
UBCP0CG48 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBCP0CG48 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBCP0CG48 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBCP0CG48 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBCP0CG48 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBCP0CG48 AC004448.1-201ENST00000458332 883 ntBASIC19.61■□□□□ 0.73
UBCP0CG48 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBCP0CG48 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.61■□□□□ 0.73
UBCP0CG48 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
UBCP0CG48 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
UBCP0CG48 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBCP0CG48 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBCP0CG48 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.61■□□□□ 0.73
UBCP0CG48 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBCP0CG48 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.6■□□□□ 0.73
UBCP0CG48 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBCP0CG48 ATP5G2P3-201ENST00000429083 425 ntBASIC19.6■□□□□ 0.73
UBCP0CG48 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.6■□□□□ 0.73
UBCP0CG48 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBCP0CG48 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.6■□□□□ 0.73
UBCP0CG48 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.6■□□□□ 0.73
UBCP0CG48 AC079630.1-202ENST00000618127 1840 ntBASIC19.6■□□□□ 0.73
UBCP0CG48 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBCP0CG48 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
UBCP0CG48 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBCP0CG48 GUSBP5-202ENST00000510805 1989 ntBASIC19.59■□□□□ 0.73
UBCP0CG48 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBCP0CG48 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.59■□□□□ 0.73
UBCP0CG48 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.59■□□□□ 0.73
UBCP0CG48 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBCP0CG48 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBCP0CG48 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBCP0CG48 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UBCP0CG48 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.58■□□□□ 0.73
UBCP0CG48 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBCP0CG48 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms