Protein–RNA interactions for Protein: P09001

MRPL3, 39S ribosomal protein L3, mitochondrial, humanhuman

Known RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL3P09001 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
MRPL3P09001 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.12■□□□□ 0.81
MRPL3P09001 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MRPL3P09001 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MRPL3P09001 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.12■□□□□ 0.81
MRPL3P09001 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.11■□□□□ 0.81
MRPL3P09001 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL3P09001 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL3P09001 AC139795.1-202ENST00000500444 432 ntBASIC20.11■□□□□ 0.81
MRPL3P09001 DUX4L18-201ENST00000553347 1267 ntBASIC20.11■□□□□ 0.81
MRPL3P09001 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.11■□□□□ 0.81
MRPL3P09001 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL3P09001 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL3P09001 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL3P09001 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL3P09001 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL3P09001 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL3P09001 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL3P09001 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.11■□□□□ 0.81
MRPL3P09001 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
MRPL3P09001 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.11■□□□□ 0.81
MRPL3P09001 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MRPL3P09001 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL3P09001 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL3P09001 LINC00526-201ENST00000581067 1875 ntBASIC20.1■□□□□ 0.81
MRPL3P09001 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL3P09001 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL3P09001 HSD17B1P1-201ENST00000590052 955 ntBASIC20.1■□□□□ 0.81
MRPL3P09001 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL3P09001 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL3P09001 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL3P09001 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL3P09001 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MRPL3P09001 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRPL3P09001 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.09■□□□□ 0.81
MRPL3P09001 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRPL3P09001 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRPL3P09001 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.09■□□□□ 0.81
MRPL3P09001 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRPL3P09001 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRPL3P09001 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRPL3P09001 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MRPL3P09001 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.09■□□□□ 0.81
MRPL3P09001 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
MRPL3P09001 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.08■□□□□ 0.81
MRPL3P09001 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
MRPL3P09001 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.08■□□□□ 0.81
MRPL3P09001 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MRPL3P09001 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MRPL3P09001 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
MRPL3P09001 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
MRPL3P09001 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
MRPL3P09001 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL3P09001 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MRPL3P09001 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL3P09001 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MRPL3P09001 AC079630.1-202ENST00000618127 1840 ntBASIC20.07■□□□□ 0.8
MRPL3P09001 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
MRPL3P09001 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.07■□□□□ 0.8
MRPL3P09001 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL3P09001 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.07■□□□□ 0.8
MRPL3P09001 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL3P09001 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.07■□□□□ 0.8
MRPL3P09001 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
MRPL3P09001 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.07■□□□□ 0.8
MRPL3P09001 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
MRPL3P09001 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL3P09001 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
MRPL3P09001 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.06■□□□□ 0.8
MRPL3P09001 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
MRPL3P09001 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.06■□□□□ 0.8
MRPL3P09001 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MRPL3P09001 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MRPL3P09001 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
MRPL3P09001 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL3P09001 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL3P09001 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL3P09001 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL3P09001 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL3P09001 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.05■□□□□ 0.8
MRPL3P09001 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
MRPL3P09001 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.05■□□□□ 0.8
MRPL3P09001 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPL3P09001 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPL3P09001 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPL3P09001 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPL3P09001 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
MRPL3P09001 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms