Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.04■■□□□ 1.6
CD4P01730 USF2-207ENST00000595068 1612 ntTSL 5 BASIC25.04■■□□□ 1.6
CD4P01730 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CD4P01730 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CD4P01730 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CD4P01730 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CD4P01730 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.03■■□□□ 1.6
CD4P01730 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.03■■□□□ 1.6
CD4P01730 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.03■■□□□ 1.6
CD4P01730 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CD4P01730 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC25.03■■□□□ 1.6
CD4P01730 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.03■■□□□ 1.6
CD4P01730 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.03■■□□□ 1.6
CD4P01730 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CD4P01730 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CD4P01730 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.02■■□□□ 1.6
CD4P01730 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD4P01730 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CD4P01730 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CD4P01730 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CD4P01730 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.02■■□□□ 1.6
CD4P01730 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD4P01730 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CD4P01730 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
CD4P01730 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.01■■□□□ 1.59
CD4P01730 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.01■■□□□ 1.59
CD4P01730 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
CD4P01730 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CD4P01730 MIR572-201ENST00000384983 95 ntBASIC25.01■■□□□ 1.59
CD4P01730 IGHV3-19-201ENST00000521488 291 ntBASIC25.01■■□□□ 1.59
CD4P01730 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
CD4P01730 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.01■■□□□ 1.59
CD4P01730 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
CD4P01730 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC25.01■■□□□ 1.59
CD4P01730 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.01■■□□□ 1.59
CD4P01730 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CD4P01730 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CD4P01730 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CD4P01730 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CD4P01730 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CD4P01730 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25■■□□□ 1.59
CD4P01730 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CD4P01730 AC004911.1-201ENST00000416316 871 ntBASIC25■■□□□ 1.59
CD4P01730 AL161729.1-201ENST00000604104 1402 ntBASIC25■■□□□ 1.59
CD4P01730 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25■■□□□ 1.59
CD4P01730 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CD4P01730 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25■■□□□ 1.59
CD4P01730 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CD4P01730 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CD4P01730 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CD4P01730 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CD4P01730 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.99■■□□□ 1.59
CD4P01730 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.99■■□□□ 1.59
CD4P01730 AC141586.4-201ENST00000624558 1573 ntBASIC24.99■■□□□ 1.59
CD4P01730 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.98■■□□□ 1.59
CD4P01730 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.98■■□□□ 1.59
CD4P01730 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC24.98■■□□□ 1.59
CD4P01730 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CD4P01730 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.98■■□□□ 1.59
CD4P01730 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.98■■□□□ 1.59
CD4P01730 AC012414.1-201ENST00000556676 535 ntBASIC24.98■■□□□ 1.59
CD4P01730 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CD4P01730 MIR6084-201ENST00000622012 110 ntBASIC24.98■■□□□ 1.59
CD4P01730 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CD4P01730 AC022211.4-201ENST00000625094 2161 ntBASIC24.98■■□□□ 1.59
CD4P01730 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.98■■□□□ 1.59
CD4P01730 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.98■■□□□ 1.59
CD4P01730 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CD4P01730 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CD4P01730 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CD4P01730 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CD4P01730 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CD4P01730 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CD4P01730 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CD4P01730 CCDC92B-201ENST00000575506 885 ntBASIC24.97■■□□□ 1.59
CD4P01730 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC24.96■■□□□ 1.59
CD4P01730 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.96■■□□□ 1.59
CD4P01730 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CD4P01730 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.96■■□□□ 1.59
CD4P01730 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.96■■□□□ 1.59
CD4P01730 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.96■■□□□ 1.59
CD4P01730 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.96■■□□□ 1.59
CD4P01730 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.96■■□□□ 1.59
CD4P01730 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CD4P01730 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.96■■□□□ 1.59
CD4P01730 AL354811.1-201ENST00000610286 706 ntBASIC24.96■■□□□ 1.59
CD4P01730 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.96■■□□□ 1.59
CD4P01730 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CD4P01730 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CD4P01730 ID1-201ENST00000376105 1233 ntBASIC24.95■■□□□ 1.58
CD4P01730 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.95■■□□□ 1.58
CD4P01730 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CD4P01730 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CD4P01730 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
CD4P01730 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.95■■□□□ 1.58
CD4P01730 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.95■■□□□ 1.58
CD4P01730 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC24.95■■□□□ 1.58
CD4P01730 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.94■■□□□ 1.58
CD4P01730 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CD4P01730 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms