Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TGFAP01135 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.54■□□□□ 0.56
TGFAP01135 SLC47A1P1-202ENST00000449666 945 ntBASIC18.54■□□□□ 0.56
TGFAP01135 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.54■□□□□ 0.56
TGFAP01135 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.54■□□□□ 0.56
TGFAP01135 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.54■□□□□ 0.56
TGFAP01135 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.54■□□□□ 0.56
TGFAP01135 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.54■□□□□ 0.56
TGFAP01135 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TGFAP01135 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TGFAP01135 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TGFAP01135 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.54■□□□□ 0.56
TGFAP01135 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.54■□□□□ 0.56
TGFAP01135 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TGFAP01135 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.53■□□□□ 0.56
TGFAP01135 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.53■□□□□ 0.56
TGFAP01135 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.53■□□□□ 0.56
TGFAP01135 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TGFAP01135 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TGFAP01135 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TGFAP01135 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.53■□□□□ 0.56
TGFAP01135 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.53■□□□□ 0.56
TGFAP01135 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TGFAP01135 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TGFAP01135 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.53■□□□□ 0.56
TGFAP01135 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TGFAP01135 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TGFAP01135 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TGFAP01135 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.52■□□□□ 0.56
TGFAP01135 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.52■□□□□ 0.56
TGFAP01135 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.52■□□□□ 0.56
TGFAP01135 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.52■□□□□ 0.56
TGFAP01135 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.52■□□□□ 0.56
TGFAP01135 AC022517.1-201ENST00000592429 346 ntBASIC18.52■□□□□ 0.56
TGFAP01135 AL358852.1-201ENST00000623174 1268 ntBASIC18.52■□□□□ 0.56
TGFAP01135 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.52■□□□□ 0.56
TGFAP01135 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
TGFAP01135 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.51■□□□□ 0.55
TGFAP01135 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.51■□□□□ 0.55
TGFAP01135 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.51■□□□□ 0.55
TGFAP01135 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TGFAP01135 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.51■□□□□ 0.55
TGFAP01135 AL137784.2-201ENST00000607332 1000 ntBASIC18.51■□□□□ 0.55
TGFAP01135 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TGFAP01135 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.51■□□□□ 0.55
TGFAP01135 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
TGFAP01135 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TGFAP01135 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.5■□□□□ 0.55
TGFAP01135 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.5■□□□□ 0.55
TGFAP01135 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.5■□□□□ 0.55
TGFAP01135 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TGFAP01135 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.5■□□□□ 0.55
TGFAP01135 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TGFAP01135 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TGFAP01135 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TGFAP01135 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TGFAP01135 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.5■□□□□ 0.55
TGFAP01135 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TGFAP01135 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TGFAP01135 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TGFAP01135 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
TGFAP01135 IKBKGP1-201ENST00000612193 1073 ntBASIC18.5■□□□□ 0.55
TGFAP01135 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.5■□□□□ 0.55
TGFAP01135 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TGFAP01135 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TGFAP01135 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TGFAP01135 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TGFAP01135 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TGFAP01135 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TGFAP01135 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TGFAP01135 KRT18P5-201ENST00000436075 1291 ntBASIC18.49■□□□□ 0.55
TGFAP01135 AC090192.1-201ENST00000517740 490 ntBASIC18.49■□□□□ 0.55
TGFAP01135 IGHV3-19-201ENST00000521488 291 ntBASIC18.49■□□□□ 0.55
TGFAP01135 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TGFAP01135 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.49■□□□□ 0.55
TGFAP01135 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.49■□□□□ 0.55
TGFAP01135 RARRES2P11-201ENST00000635158 484 ntBASIC18.49■□□□□ 0.55
TGFAP01135 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TGFAP01135 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TGFAP01135 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.48■□□□□ 0.55
TGFAP01135 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TGFAP01135 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.48■□□□□ 0.55
TGFAP01135 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.48■□□□□ 0.55
TGFAP01135 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TGFAP01135 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.48■□□□□ 0.55
TGFAP01135 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.48■□□□□ 0.55
TGFAP01135 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.48■□□□□ 0.55
TGFAP01135 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.48■□□□□ 0.55
TGFAP01135 AL031602.1-201ENST00000633169 911 ntBASIC18.48■□□□□ 0.55
TGFAP01135 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
TGFAP01135 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.48■□□□□ 0.55
TGFAP01135 AC133637.1-201ENST00000624115 1537 ntBASIC18.48■□□□□ 0.55
TGFAP01135 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
TGFAP01135 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TGFAP01135 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TGFAP01135 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TGFAP01135 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TGFAP01135 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
TGFAP01135 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
TGFAP01135 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms