Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CCNKO75909 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CCNKO75909 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCNKO75909 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCNKO75909 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCNKO75909 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.48■□□□□ 0.71
CCNKO75909 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCNKO75909 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CCNKO75909 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.48■□□□□ 0.71
CCNKO75909 C11orf96-202ENST00000528572 1834 ntBASIC19.48■□□□□ 0.71
CCNKO75909 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CCNKO75909 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCNKO75909 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
CCNKO75909 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CCNKO75909 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCNKO75909 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.47■□□□□ 0.71
CCNKO75909 DUX4L28-201ENST00000623687 678 ntBASIC19.47■□□□□ 0.71
CCNKO75909 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNKO75909 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.47■□□□□ 0.71
CCNKO75909 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCNKO75909 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNKO75909 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNKO75909 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCNKO75909 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNKO75909 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CCNKO75909 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CCNKO75909 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CCNKO75909 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCNKO75909 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CCNKO75909 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNKO75909 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CCNKO75909 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNKO75909 MIR6089-201ENST00000616698 64 ntBASIC19.46■□□□□ 0.71
CCNKO75909 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNKO75909 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNKO75909 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.46■□□□□ 0.71
CCNKO75909 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNKO75909 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.46■□□□□ 0.71
CCNKO75909 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.46■□□□□ 0.71
CCNKO75909 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNKO75909 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CCNKO75909 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNKO75909 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCNKO75909 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNKO75909 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCNKO75909 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNKO75909 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNKO75909 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.45■□□□□ 0.7
CCNKO75909 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNKO75909 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CCNKO75909 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNKO75909 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCNKO75909 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNKO75909 AF106564.1-201ENST00000607058 2553 ntBASIC19.45■□□□□ 0.7
CCNKO75909 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNKO75909 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCNKO75909 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNKO75909 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCNKO75909 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CCNKO75909 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCNKO75909 HLA-L-211ENST00000482052 1765 ntBASIC19.44■□□□□ 0.7
CCNKO75909 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNKO75909 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNKO75909 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCNKO75909 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCNKO75909 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCNKO75909 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNKO75909 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNKO75909 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNKO75909 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCNKO75909 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNKO75909 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCNKO75909 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNKO75909 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC19.43■□□□□ 0.7
CCNKO75909 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCNKO75909 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCNKO75909 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CCNKO75909 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.43■□□□□ 0.7
CCNKO75909 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNKO75909 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.42■□□□□ 0.7
CCNKO75909 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNKO75909 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.42■□□□□ 0.7
CCNKO75909 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCNKO75909 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCNKO75909 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCNKO75909 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNKO75909 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCNKO75909 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CCNKO75909 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNKO75909 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNKO75909 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNKO75909 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.41■□□□□ 0.7
CCNKO75909 ESRRAP2-201ENST00000418437 1549 ntBASIC19.41■□□□□ 0.7
CCNKO75909 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNKO75909 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNKO75909 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCNKO75909 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNKO75909 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.41■□□□□ 0.7
CCNKO75909 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCNKO75909 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms