Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pfdn2O70591 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pfdn2O70591 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.59■□□□□ 0.25
Pfdn2O70591 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pfdn2O70591 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pfdn2O70591 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pfdn2O70591 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pfdn2O70591 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pfdn2O70591 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pfdn2O70591 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pfdn2O70591 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pfdn2O70591 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pfdn2O70591 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
Pfdn2O70591 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pfdn2O70591 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pfdn2O70591 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pfdn2O70591 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pfdn2O70591 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pfdn2O70591 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pfdn2O70591 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pfdn2O70591 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pfdn2O70591 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pfdn2O70591 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pfdn2O70591 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Pfdn2O70591 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pfdn2O70591 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pfdn2O70591 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pfdn2O70591 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pfdn2O70591 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pfdn2O70591 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pfdn2O70591 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pfdn2O70591 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Pfdn2O70591 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pfdn2O70591 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.57■□□□□ 0.24
Pfdn2O70591 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pfdn2O70591 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pfdn2O70591 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pfdn2O70591 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pfdn2O70591 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pfdn2O70591 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pfdn2O70591 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pfdn2O70591 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pfdn2O70591 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pfdn2O70591 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC16.56■□□□□ 0.24
Pfdn2O70591 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pfdn2O70591 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pfdn2O70591 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pfdn2O70591 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pfdn2O70591 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pfdn2O70591 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC16.56■□□□□ 0.24
Pfdn2O70591 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pfdn2O70591 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pfdn2O70591 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pfdn2O70591 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Pfdn2O70591 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pfdn2O70591 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pfdn2O70591 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pfdn2O70591 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pfdn2O70591 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pfdn2O70591 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pfdn2O70591 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pfdn2O70591 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pfdn2O70591 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pfdn2O70591 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.54■□□□□ 0.24
Pfdn2O70591 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.54■□□□□ 0.24
Pfdn2O70591 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pfdn2O70591 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.54■□□□□ 0.24
Pfdn2O70591 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pfdn2O70591 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Pfdn2O70591 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.53■□□□□ 0.24
Pfdn2O70591 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pfdn2O70591 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pfdn2O70591 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pfdn2O70591 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pfdn2O70591 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pfdn2O70591 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn2O70591 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Pfdn2O70591 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn2O70591 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn2O70591 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC16.52■□□□□ 0.24
Pfdn2O70591 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pfdn2O70591 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.52■□□□□ 0.24
Pfdn2O70591 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Pfdn2O70591 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pfdn2O70591 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pfdn2O70591 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pfdn2O70591 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pfdn2O70591 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms