Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTL8CO15255 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTL8CO15255 CEBPA-AS1-201ENST00000592982 2198 ntBASIC15.07■□□□□ 0
RTL8CO15255 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
RTL8CO15255 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RTL8CO15255 MIR572-201ENST00000384983 95 ntBASIC15.06■□□□□ 0
RTL8CO15255 IGHV3-19-201ENST00000521488 291 ntBASIC15.06■□□□□ 0
RTL8CO15255 AC012414.1-201ENST00000556676 535 ntBASIC15.06■□□□□ 0
RTL8CO15255 NTF6G-201ENST00000591094 616 ntBASIC15.06■□□□□ 0
RTL8CO15255 MIR6089-201ENST00000616698 64 ntBASIC15.06■□□□□ 0
RTL8CO15255 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC15.06■□□□□ 0
RTL8CO15255 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC15.06■□□□□ 0
RTL8CO15255 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTL8CO15255 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTL8CO15255 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.06■□□□□ 0
RTL8CO15255 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
RTL8CO15255 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
RTL8CO15255 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTL8CO15255 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
RTL8CO15255 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC15.05■□□□□ -0
RTL8CO15255 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC15.05■□□□□ -0
RTL8CO15255 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC15.05■□□□□ -0
RTL8CO15255 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC15.05■□□□□ -0
RTL8CO15255 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC15.05■□□□□ -0
RTL8CO15255 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RTL8CO15255 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC15.05■□□□□ -0
RTL8CO15255 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RTL8CO15255 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTL8CO15255 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
RTL8CO15255 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC15.04■□□□□ -0
RTL8CO15255 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.04■□□□□ -0
RTL8CO15255 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
RTL8CO15255 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC15.04■□□□□ -0
RTL8CO15255 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL8CO15255 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
RTL8CO15255 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.04■□□□□ -0
RTL8CO15255 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.04■□□□□ -0
RTL8CO15255 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.04■□□□□ -0
RTL8CO15255 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.04■□□□□ -0
RTL8CO15255 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL8CO15255 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL8CO15255 AL354811.1-201ENST00000610286 706 ntBASIC15.04■□□□□ -0
RTL8CO15255 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
RTL8CO15255 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC15.04■□□□□ -0
RTL8CO15255 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTL8CO15255 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
RTL8CO15255 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL8CO15255 USF2-207ENST00000595068 1612 ntTSL 5 BASIC15.03■□□□□ -0
RTL8CO15255 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC15.03■□□□□ -0
RTL8CO15255 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC15.03■□□□□ -0
RTL8CO15255 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
RTL8CO15255 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL8CO15255 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.03■□□□□ -0
RTL8CO15255 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.03■□□□□ -0
RTL8CO15255 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC15.03■□□□□ -0
RTL8CO15255 KRT18P14-201ENST00000534205 1250 ntBASIC15.03■□□□□ -0
RTL8CO15255 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.03■□□□□ -0
RTL8CO15255 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTL8CO15255 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC15.03■□□□□ -0
RTL8CO15255 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
RTL8CO15255 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC15.03■□□□□ -0
RTL8CO15255 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTL8CO15255 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
RTL8CO15255 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTL8CO15255 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
RTL8CO15255 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTL8CO15255 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
RTL8CO15255 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
RTL8CO15255 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTL8CO15255 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC15.02■□□□□ -0
RTL8CO15255 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
RTL8CO15255 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
RTL8CO15255 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTL8CO15255 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTL8CO15255 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.01□□□□□ -0.01
RTL8CO15255 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RTL8CO15255 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.01□□□□□ -0.01
RTL8CO15255 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC15.01□□□□□ -0.01
RTL8CO15255 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.01□□□□□ -0.01
RTL8CO15255 HLA-L-209ENST00000420110 1011 ntBASIC15.01□□□□□ -0.01
RTL8CO15255 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC15.01□□□□□ -0.01
RTL8CO15255 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.01□□□□□ -0.01
RTL8CO15255 TERF1P2-201ENST00000583350 1212 ntBASIC15.01□□□□□ -0.01
RTL8CO15255 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
RTL8CO15255 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTL8CO15255 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RTL8CO15255 AC141586.4-201ENST00000624558 1573 ntBASIC15.01□□□□□ -0.01
RTL8CO15255 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
RTL8CO15255 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RTL8CO15255 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RTL8CO15255 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
RTL8CO15255 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
RTL8CO15255 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15□□□□□ -0.01
RTL8CO15255 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC15□□□□□ -0.01
RTL8CO15255 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RTL8CO15255 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RTL8CO15255 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RTL8CO15255 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15□□□□□ -0.01
RTL8CO15255 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC15□□□□□ -0.01
RTL8CO15255 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms