Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
CHD2O14647 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHD2O14647 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC31.92■■■□□ 2.7
CHD2O14647 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
CHD2O14647 AC016769.1-201ENST00000409132 1010 ntBASIC31.92■■■□□ 2.7
CHD2O14647 OR2I1P-207ENST00000453522 948 ntBASIC31.92■■■□□ 2.7
CHD2O14647 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC31.92■■■□□ 2.7
CHD2O14647 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC31.92■■■□□ 2.7
CHD2O14647 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC31.92■■■□□ 2.7
CHD2O14647 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC31.92■■■□□ 2.7
CHD2O14647 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC31.92■■■□□ 2.7
CHD2O14647 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CHD2O14647 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC31.91■■■□□ 2.7
CHD2O14647 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CHD2O14647 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC31.91■■■□□ 2.7
CHD2O14647 GXYLT1P5-201ENST00000614548 1189 ntBASIC31.91■■■□□ 2.7
CHD2O14647 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
CHD2O14647 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CHD2O14647 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC31.91■■■□□ 2.7
CHD2O14647 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC31.9■■■□□ 2.7
CHD2O14647 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHD2O14647 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
CHD2O14647 AC080038.1-201ENST00000611274 1154 ntBASIC31.9■■■□□ 2.7
CHD2O14647 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
CHD2O14647 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC31.9■■■□□ 2.7
CHD2O14647 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CHD2O14647 AC133637.1-201ENST00000624115 1537 ntBASIC31.9■■■□□ 2.7
CHD2O14647 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CHD2O14647 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CHD2O14647 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
CHD2O14647 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC31.89■■■□□ 2.7
CHD2O14647 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC31.89■■■□□ 2.7
CHD2O14647 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
CHD2O14647 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CHD2O14647 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.89■■■□□ 2.7
CHD2O14647 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CHD2O14647 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC31.89■■■□□ 2.7
CHD2O14647 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.69
CHD2O14647 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
CHD2O14647 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC31.89■■■□□ 2.69
CHD2O14647 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC31.89■■■□□ 2.69
CHD2O14647 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.88■■■□□ 2.69
CHD2O14647 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CHD2O14647 AC092803.2-201ENST00000564287 1899 ntBASIC31.88■■■□□ 2.69
CHD2O14647 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC31.88■■■□□ 2.69
CHD2O14647 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
CHD2O14647 LHPP-203ENST00000392757 840 ntTSL 3 BASIC31.88■■■□□ 2.69
CHD2O14647 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC31.88■■■□□ 2.69
CHD2O14647 TPRG1LP1-201ENST00000598702 760 ntBASIC31.88■■■□□ 2.69
CHD2O14647 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHD2O14647 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHD2O14647 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHD2O14647 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CHD2O14647 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC31.87■■■□□ 2.69
CHD2O14647 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC31.87■■■□□ 2.69
CHD2O14647 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.87■■■□□ 2.69
CHD2O14647 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
CHD2O14647 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CHD2O14647 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC31.86■■■□□ 2.69
CHD2O14647 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
CHD2O14647 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.86■■■□□ 2.69
CHD2O14647 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC31.86■■■□□ 2.69
CHD2O14647 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC31.86■■■□□ 2.69
CHD2O14647 AL499627.2-201ENST00000606283 725 ntBASIC31.86■■■□□ 2.69
CHD2O14647 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC31.86■■■□□ 2.69
CHD2O14647 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHD2O14647 AC137761.2-201ENST00000561729 223 ntBASIC31.85■■■□□ 2.69
CHD2O14647 AC145350.3-201ENST00000569033 163 ntBASIC31.85■■■□□ 2.69
CHD2O14647 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHD2O14647 MPST-204ENST00000404393 1329 ntTSL 5 BASIC31.85■■■□□ 2.69
CHD2O14647 ESRRAP2-201ENST00000418437 1549 ntBASIC31.85■■■□□ 2.69
CHD2O14647 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CHD2O14647 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.85■■■□□ 2.69
CHD2O14647 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHD2O14647 AC026185.1-201ENST00000445748 174 ntBASIC31.84■■■□□ 2.69
CHD2O14647 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CHD2O14647 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC31.84■■■□□ 2.69
CHD2O14647 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CHD2O14647 AC091060.1-201ENST00000623524 1766 ntBASIC31.84■■■□□ 2.69
CHD2O14647 LINC02228-203ENST00000641970 1355 ntBASIC31.84■■■□□ 2.69
CHD2O14647 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
CHD2O14647 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
CHD2O14647 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC31.84■■■□□ 2.69
CHD2O14647 AP005435.1-201ENST00000529293 1178 ntBASIC31.84■■■□□ 2.69
CHD2O14647 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CHD2O14647 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC31.84■■■□□ 2.69
CHD2O14647 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CHD2O14647 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHD2O14647 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHD2O14647 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
CHD2O14647 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
CHD2O14647 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC31.83■■■□□ 2.69
CHD2O14647 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC31.83■■■□□ 2.69
CHD2O14647 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHD2O14647 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CHD2O14647 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.83■■■□□ 2.69
CHD2O14647 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.83■■■□□ 2.69
CHD2O14647 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CHD2O14647 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CHD2O14647 PPP1R14BP3-201ENST00000509033 445 ntBASIC31.82■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms