Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV1-2A0A0B4J238 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV1-2A0A0B4J238 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 C11orf96-202ENST00000528572 1834 ntBASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 AC139530.1-201ENST00000575312 1977 ntBASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV1-2A0A0B4J238 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV1-2A0A0B4J238 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV1-2A0A0B4J238 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.58■□□□□ 0.73
TRAV1-2A0A0B4J238 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV1-2A0A0B4J238 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV1-2A0A0B4J238 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.58■□□□□ 0.73
TRAV1-2A0A0B4J238 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
TRAV1-2A0A0B4J238 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
TRAV1-2A0A0B4J238 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TRAV1-2A0A0B4J238 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV1-2A0A0B4J238 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TRAV1-2A0A0B4J238 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
TRAV1-2A0A0B4J238 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV1-2A0A0B4J238 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV1-2A0A0B4J238 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV1-2A0A0B4J238 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV1-2A0A0B4J238 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 AC131274.2-201ENST00000580697 1507 ntBASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.57■□□□□ 0.72
TRAV1-2A0A0B4J238 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV1-2A0A0B4J238 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.56■□□□□ 0.72
TRAV1-2A0A0B4J238 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TRAV1-2A0A0B4J238 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV1-2A0A0B4J238 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV1-2A0A0B4J238 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.56■□□□□ 0.72
TRAV1-2A0A0B4J238 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRAV1-2A0A0B4J238 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV1-2A0A0B4J238 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV1-2A0A0B4J238 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.56■□□□□ 0.72
TRAV1-2A0A0B4J238 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV1-2A0A0B4J238 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 AC079630.1-202ENST00000618127 1840 ntBASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 AL137060.1-201ENST00000618151 2648 ntBASIC19.55■□□□□ 0.72
TRAV1-2A0A0B4J238 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV1-2A0A0B4J238 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV1-2A0A0B4J238 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV1-2A0A0B4J238 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
TRAV1-2A0A0B4J238 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV1-2A0A0B4J238 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV1-2A0A0B4J238 AC009831.1-201ENST00000580420 1582 ntBASIC19.54■□□□□ 0.72
TRAV1-2A0A0B4J238 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV1-2A0A0B4J238 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV1-2A0A0B4J238 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV1-2A0A0B4J238 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms