Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 AL627223.1-201ENST00000416693 442 ntBASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 ARSEP1-201ENST00000420443 635 ntBASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 FO681548.1-201ENST00000455617 1132 ntBASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 AC093520.2-201ENST00000561830 333 ntBASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 AL049840.4-201ENST00000602422 811 ntBASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 AC140113.2-201ENST00000604370 208 ntBASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 AC025183.3-201ENST00000623526 1482 ntBASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 AC020910.5-201ENST00000623668 1865 ntBASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 CTAGE10P-201ENST00000318353 2408 ntBASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 AC008806.1-201ENST00000624962 2443 ntBASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 AC008764.8-201ENST00000623966 2717 ntBASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 EBF1-201ENST00000313708 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
SEC22CQ9BRL7 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 TBC1D29-202ENST00000580161 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 SCP2-203ENST00000371514 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 SHROOM2P1-201ENST00000434773 2384 ntBASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 PSMD12-201ENST00000356126 4406 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 AC004870.1-201ENST00000315132 882 ntBASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SEC22CQ9BRL7 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms