Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.76■□□□□ 0.11
ZNF397Q8NF99 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 CNN2P8-201ENST00000421872 913 ntBASIC15.76■□□□□ 0.11
ZNF397Q8NF99 KRT43P-201ENST00000434019 910 ntBASIC15.76■□□□□ 0.11
ZNF397Q8NF99 C2orf27AP3-201ENST00000434123 579 ntBASIC15.76■□□□□ 0.11
ZNF397Q8NF99 AC016694.1-201ENST00000434179 700 ntBASIC15.76■□□□□ 0.11
ZNF397Q8NF99 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 KRT18P8-201ENST00000581937 1246 ntBASIC15.76■□□□□ 0.11
ZNF397Q8NF99 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 AL354718.3-201ENST00000616414 581 ntBASIC15.76■□□□□ 0.11
ZNF397Q8NF99 CR382287.1-201ENST00000623954 586 ntBASIC15.76■□□□□ 0.11
ZNF397Q8NF99 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 AC125807.2-201ENST00000513358 3514 ntBASIC15.76■□□□□ 0.11
ZNF397Q8NF99 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
ZNF397Q8NF99 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 AC063926.2-201ENST00000623766 1308 ntBASIC15.75■□□□□ 0.11
ZNF397Q8NF99 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 CD8B2-202ENST00000417670 633 ntBASIC15.75■□□□□ 0.11
ZNF397Q8NF99 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 RNA5SP486-201ENST00000515961 83 ntBASIC15.75■□□□□ 0.11
ZNF397Q8NF99 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 AL162274.1-201ENST00000617191 1098 ntBASIC15.75■□□□□ 0.11
ZNF397Q8NF99 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 AC002472.3-201ENST00000640124 621 ntBASIC15.75■□□□□ 0.11
ZNF397Q8NF99 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.75■□□□□ 0.11
ZNF397Q8NF99 FTO-214ENST00000636218 2227 ntTSL 5 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC15.75■□□□□ 0.11
ZNF397Q8NF99 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC15.74■□□□□ 0.11
ZNF397Q8NF99 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF397Q8NF99 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC15.74■□□□□ 0.11
ZNF397Q8NF99 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF397Q8NF99 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF397Q8NF99 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF397Q8NF99 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
ZNF397Q8NF99 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms