Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TMEM53Q6P2H8 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 AC016397.2-201ENST00000624848 1985 ntBASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 FTLP10-202ENST00000505798 471 ntBASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 RNA5SP486-201ENST00000515961 83 ntBASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 GNRHR2-203ENST00000581100 1187 ntBASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 SALL4P5-201ENST00000419001 1760 ntBASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 AC027369.3-201ENST00000530465 3707 ntBASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
TMEM53Q6P2H8 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 MESTP3-201ENST00000503460 968 ntBASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 RAB43P1-201ENST00000561790 589 ntBASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 AC106886.1-201ENST00000568660 600 ntBASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 AL162274.1-201ENST00000617191 1098 ntBASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM53Q6P2H8 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms